RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ZBED5Q49AG3 693 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 CHST9Q7L1S5 443 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 RGL4Q8IZJ4 473 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 CLEC4FQ8N1N0 589 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 DPP10Q8N608 796 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 GTF2H4Q92759 462 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 GFM2Q969S9 779 aaKnown RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 PYCR2Q96C36 320 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ALG14Q96F25 216 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF334Q9HCZ1 680 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 HACD3Q9P035 362 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 LIMD1Q9UGP4 676 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 YIPF1Q9Y548 306 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 PCDHB3Q9Y5E6 796 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 H3BMQ9 156 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 PQBP1O60828 265 aaKnown RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 SEC22BO75396 215 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 NR4A1P22736 598 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ARHGEF7Q14155 803 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 AARS2Q5JTZ9 985 aaKnown RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 GCNT7Q6ZNI0 430 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ADAMTSL2Q86TH1 951 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 SLC13A3Q8WWT9 602 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 COG8Q96MW5 612 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 HPS4Q9NQG7 708 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF490Q9ULM2 529 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-223ENST00000641597 ANGPTL3Q9Y5C1 460 aa16.5■□□□□ 0.23
PHGDH-223ENST00000641597 TRIM64CA6NLI5 447 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 RAD51BO15315 384 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 OTCP00480 354 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 FCGR1AP12314 374 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 GJA1P17302 382 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 GGT1P19440 569 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 CTSOP43234 321 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 TUFMP49411 452 aaKnown RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 PWP1Q13610 501 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 AASDHQ4L235 1098 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 XKR5Q6UX68 686 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 USP51Q70EK9 711 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 DET1Q7L5Y6 550 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 EFL1Q7Z2Z2 1120 aaKnown RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 TMEM179BQ7Z7N9 219 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 GALNT10Q86SR1 603 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 OR2T12Q8NG77 320 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 FAM81AQ8TBF8 368 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 FAM8A1Q9UBU6 413 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 AASSQ9UDR5 926 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF639Q9UID6 485 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 DLGAP4Q9Y2H0 992 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 TRIM64A6NGJ6 449 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 NPIPB15A6NHN6 443 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 PFDN6O15212 129 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 GREM1O60565 184 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 LRATO95237 230 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 S100BP04271 92 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 CDH1P12830 882 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 MATN1P21941 496 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 TACR1P25103 407 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 ESRRGP62508 458 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 FXNQ16595 210 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 IMPG1Q17R60 797 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 KLHL35Q6PF15 583 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 ELMSAN1Q6PJG2 1045 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 DNAJB7Q7Z6W7 309 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 GPR26Q8NDV2 337 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 TNIP2Q8NFZ5 429 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 ABTB1Q969K4 478 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 RHBDF1Q96CC6 855 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 SMG9Q9H0W8 520 aaKnown RBP16.49■□□□□ 0.23
PHGDH-223ENST00000641597 CIDEBQ9UHD4 219 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 TMCO1Q9UM00 188 aa16.49■□□□□ 0.23
PHGDH-223ENST00000641597 PRKD3O94806 890 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ALBP02768 609 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ALPLP05186 524 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ANXA6P08133 673 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 MRPL19P49406 292 aaKnown RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ATN1P54259 1190 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ADARP55265 1226 aaKnown RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 TMED1Q13445 227 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 DCTN2Q13561 401 aaKnown RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ACBD5Q5T8D3 534 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 SLC43A3Q8NBI5 491 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 PDPRQ8NCN5 879 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF461Q8TAF7 563 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 INPP5KQ9BT40 448 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 BDH2Q9BUT1 245 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 TOR3AQ9H497 397 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ELAC1Q9H777 363 aaKnown RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 MAGEE1Q9HCI5 957 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 TIMMDC1Q9NPL8 285 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 OPTCQ9UBM4 332 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ADGRE2Q9UHX3 823 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 CRLS1Q9UJA2 301 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 INVSQ9Y283 1065 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 MYO7AQ13402 2215 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 MTX2O75431 263 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 INHAP05111 366 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF7P17097 686 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 EPORP19235 508 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 CYP4F8P98187 520 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms