RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 RADILQ96JH8 1075 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 MCMBPQ9BTE3 642 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 TMEM109Q9BVC6 243 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SLC6A17Q9H1V8 727 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CATSPERZQ9NTU4 200 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 VPS18Q9P253 973 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SLC17A6Q9P2U8 582 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 FETUBQ9UGM5 382 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 PKP3Q9Y446 797 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 LRRK1Q38SD2 2015 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 TRPM6Q9BX84 2022 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ZNF106Q9H2Y7 1883 aaKnown RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CCDC162PA2VCL2 907 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 GOLGA8KD6RF30 607 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 POC1B-GALNT4F8VUJ3 575 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 GOLGA8TH3BQL2 631 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 H7C0S8 307 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 GSNP06396 782 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 C1SP09871 688 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ZNF30P17039 623 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SERPINF1P36955 418 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 HADHAP40939 763 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 STC1P52823 247 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ZXDAP98168 799 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ZBTB16Q05516 673 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ELP6Q0PNE2 266 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 DAG1Q14118 895 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ARHGEF7Q14155 803 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CEP85LQ5SZL2 805 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 TEDDM1Q5T9Z0 273 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 AGBL4Q5VU57 503 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 TRIM67Q6ZTA4 783 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 MARK2Q7KZI7 788 aaKnown RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CNTN4Q8IWV2 1026 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CTAGE3PQ8IX95 158 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 HDDC3Q8N4P3 179 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ANKRD49Q8WVL7 239 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SLC44A1Q8WWI5 657 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ZNF75CPQ92670 426 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 HTRA1Q92743 480 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CDKL2Q92772 493 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 RAB7BQ96AH8 199 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 FAM131CQ96AQ9 280 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CLDN23Q96B33 292 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 MAELQ96JY0 434 aaKnown RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 MRGPRX1Q96LB2 322 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 RUFY1Q96T51 708 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 AGAP2Q99490 1192 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 CNPPD1Q9BV87 410 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 OSBPL6Q9BZF3 934 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ROPN1BQ9BZX4 212 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 MFSD1Q9H3U5 465 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 ROPN1Q9HAT0 212 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-220ENST00000640076 BPIFA1Q9NP55 256 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 OBP2BQ9NPH6 170 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SERGEFQ9UGK8 458 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 SCML1Q9UN30 329 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 FADS3Q9Y5Q0 445 aa7.88□□□□□ -1.15
SCARB2-220ENST00000640076 TCRBV21S2A2A0A5A6 115 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 OR51F1A6NGY5 319 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 SMIM23A6NLE4 172 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 H0Y858 1186 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 SYT5O00445 386 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 GAPDHSO14556 408 aaPredicted RBP7.87□□□□□ -1.15
SCARB2-220ENST00000640076 RASGRF2O14827 1237 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 UGT1A9O60656 530 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 ATG13O75143 517 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 GOT2P00505 430 aaKnown RBP7.87□□□□□ -1.15
SCARB2-220ENST00000640076 GABRG2P18507 467 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 CD40P25942 277 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 SLC19A1P41440 591 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 SLCO1A2P46721 670 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 SEPHS1P49903 392 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 DGKEP52429 567 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 TAS2R38P59533 333 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 XIAPP98170 497 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 NAB1Q13506 487 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 THOC5Q13769 683 aaKnown RBP7.87□□□□□ -1.15
SCARB2-220ENST00000640076 PLCL1Q15111 1095 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 RASA2Q15283 850 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 KRT71Q3SY84 523 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 ZNF470Q6ECI4 717 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 NEPROQ6NW34 567 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 AFTPHQ6ULP2 937 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.87□□□□□ -1.15
SCARB2-220ENST00000640076 LIPIQ6XZB0 460 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 HSD11B1LQ7Z5J1 315 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 PTAR1Q7Z6K3 402 aaPredicted RBP7.87□□□□□ -1.15
SCARB2-220ENST00000640076 TDRPQ86YL5 185 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 CPOQ8IVL8 374 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 SIPA1Q96FS4 1042 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 RBM18Q96H35 190 aaKnown RBP7.87□□□□□ -1.15
SCARB2-220ENST00000640076 PAFAH2Q99487 392 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 SH3GL2Q99962 352 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 OMDQ99983 421 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 WRAP53Q9BUR4 548 aaKnown RBP7.87□□□□□ -1.15
SCARB2-220ENST00000640076 PRDM14Q9GZV8 571 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 UGT1A7Q9HAW7 530 aa7.87□□□□□ -1.15
SCARB2-220ENST00000640076 UGT1A10Q9HAW8 530 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms