RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	GAS8	O95995	478 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	RAB40AL	P0C0E4	278 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	CA5A	P35218	305 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	CTNNA1	P35221	906 aa	Known RBP	14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	PTGIR	P43119	386 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	CD97	P48960	835 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	LMAN1	P49257	510 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	ITGA1	P56199	1179 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	IL10RA	Q13651	578 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	SYTL3	Q4VX76	610 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	RANBP10	Q6VN20	620 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	AMIGO1	Q86WK6	493 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	SYTL1	Q8IYJ3	562 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	DSEL	Q8IZU8	1212 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	CCDC110	Q8TBZ0	833 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	14.27	□□□□□ -0.13	7e-6	■■■■■ 27.5
TARDBP-231	ENST00000639599	SGSM3	Q96HU1	749 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	NLN	Q9BYT8	704 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	EFR3B	Q9Y2G0	817 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	PCDHGB7	Q9Y5F8	929 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	SETX	Q7Z333	2677 aa	Known RBP	14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	BLACE	A4D250	179 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	GSTM1	P09488	218 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	ATXN8OS	P0DMR3	200 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	ACRV1	P26436	265 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	VARS	P26640	1264 aa	Known RBP	14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	PRDX3	P30048	256 aa	Known RBP	14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	VAV2	P52735	878 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	ZNF140	P52738	457 aa	Predicted RBP	14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	GSTM4	Q03013	218 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	RPA4	Q13156	261 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	OLIG2	Q13516	323 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	KYNU	Q16719	465 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	PRAMEF17	Q5VTA0	474 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	CAPRIN2	Q6IMN6	1127 aa	Known RBP	14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	HPS6	Q86YV9	775 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	TMTC1	Q8IUR5	882 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	LILRA3	Q8N6C8	439 aa	Predicted RBP	14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	GALNT11	Q8NCW6	608 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	OR52E1	Q8NGJ3	308 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	DNAJC1	Q96KC8	554 aa	Known RBP	14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	PPM1M	Q96MI6	270 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	TTC1	Q99614	292 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	FAM118B	Q9BPY3	351 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	DPH2	Q9BQC3	489 aa	Predicted RBP	14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	LRRC40	Q9H9A6	602 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	TCFL5	Q9UL49	500 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599	PCDHA3	Q9Y5H8	950 aa		14.26	□□□□□ -0.13
TARDBP-231	ENST00000639599		A6NL46	340 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	BTN3A1	O00481	513 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	CCL22	O00626	93 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	ZNF185	O15231	689 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	LCA5L	O95447	670 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	FTH1	P02794	183 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	PDGFA	P04085	211 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	ADRA1A	P35348	466 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	CD151	P48509	253 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	XIAP	P98170	497 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	CACNG1	Q06432	222 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	ABR	Q12979	859 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	PRKG2	Q13237	762 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	SPARCL1	Q14515	664 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	P3H1	Q32P28	736 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	PTCHD3	Q3KNS1	767 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	NADK2	Q4G0N4	442 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	PLEKHS1	Q5SXH7	462 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	MED25	Q71SY5	747 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	SERPINA9	Q86WD7	417 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	UBL4B	Q8N7F7	174 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	TMEM102	Q8N9M5	508 aa	Predicted RBP	14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	TTC13	Q8NBP0	860 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	OR1L3	Q8NH93	324 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	TFG	Q92734	400 aa	Predicted RBP	14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	C19orf43	Q9BQ61	176 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	KLHL25	Q9H0H3	589 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	GPR83	Q9NYM4	423 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	ACTR10	Q9NZ32	417 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	SMARCAL1	Q9NZC9	954 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	NDOR1	Q9UHB4	597 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	TFR2	Q9UP52	801 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	ASF1A	Q9Y294	204 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	TENM4	Q6N022	2769 aa		14.25	□□□□□ -0.13
TARDBP-231	ENST00000639599	PEX12	O00623	359 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	PSMD3	O43242	534 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	KLHL41	O60662	606 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	AP2A2	O94973	939 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	IGHE	P01854	428 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	ALPP	P05187	535 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	CD63	P08962	238 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	ST6GAL1	P15907	406 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	GNLY	P22749	145 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	OTX2	P32243	289 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	SHMT2	P34897	504 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	PTPN7	P35236	360 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	TBX2	Q13207	712 aa	Predicted RBP	14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	NCF4	Q15080	339 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	KIAA1328	Q86T90	577 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	TXLNB	Q8N3L3	684 aa		14.24	□□□□□ -0.13
TARDBP-231	ENST00000639599	TC2N	Q8N9U0	490 aa		14.24	□□□□□ -0.13

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