RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 LCN10Q6JVE6 187 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 KLHDC8BQ8IXV7 354 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 DSELQ8IZU8 1212 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 CALR3Q96L12 384 aaKnown RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 LRFN5Q96NI6 719 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 FERD3LQ96RJ6 166 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 FANCEQ9HB96 536 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 C1GALT1Q9NS00 363 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 ZDHHC3Q9NYG2 299 aa16.38■□□□□ 0.21
SMN2-216ENST00000638794 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 FARSAQ9Y285 508 aaKnown RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 REXO2Q9Y3B8 237 aaKnown RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 RP1L1Q8IWN7 2480 aaPredicted RBP16.38■□□□□ 0.21
SMN2-216ENST00000638794 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 ARGFXA6NJG6 315 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 TMEM150CB9EJG8 249 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 MEN1O00255 615 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 MATN2O00339 956 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 BTN3A3O00478 584 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 BTN3A1O00481 513 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 KLK3P07288 261 aaPredicted RBP16.37■□□□□ 0.21
SMN2-216ENST00000638794 PDHA2P29803 388 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 PRDX3P30048 256 aaKnown RBP16.37■□□□□ 0.21
SMN2-216ENST00000638794 GSDMDP57764 484 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 ZRANB3Q5FWF4 1079 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 ZNF789Q5FWF6 425 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 PLEKHS1Q5SXH7 462 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 KCTD11Q693B1 232 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 SERPINA9Q86WD7 417 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 ENDOVQ8N8Q3 282 aaKnown RBP16.37■□□□□ 0.21
SMN2-216ENST00000638794 LRRC57Q8N9N7 239 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 OR52E1Q8NGJ3 308 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 OR1L3Q8NH93 324 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 CPT1BQ92523 772 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 PANX2Q96RD6 677 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 LACRTQ9GZZ8 138 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 VPS37BQ9H9H4 285 aa16.37■□□□□ 0.21
SMN2-216ENST00000638794 PRRC2CQ9Y520 2896 aaKnown RBP16.37■□□□□ 0.21
SMN2-216ENST00000638794 UTP20O75691 2785 aaKnown RBP16.37■□□□□ 0.21
SMN2-216ENST00000638794 FER1L5A0AVI2 2057 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 SPTAN1Q13813 2472 aaKnown RBP16.36■□□□□ 0.21
SMN2-216ENST00000638794 BTNL10A8MVZ5 291 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 H7C0S8 307 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
SMN2-216ENST00000638794 ST6GAL1P15907 406 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 TPH1P17752 444 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 RORAP35398 523 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 CETN2P41208 172 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 PTGIRP43119 386 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 PREPP48147 710 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 CD151P48509 253 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 FAM69BQ5VUD6 431 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 ARHGEF18Q6ZSZ5 1173 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 ATCAYQ86WG3 371 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 TMTC1Q8IUR5 882 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 CLDN19Q8N6F1 224 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 PHC3Q8NDX5 983 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 ADAMTS17Q8TE56 1095 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 LRRC45Q96CN5 670 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 CLIP3Q96DZ5 547 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 HGH1Q9BTY7 390 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 SLC25A23Q9BV35 468 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 PITPNM3Q9BZ71 974 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 ING2Q9H160 280 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 TFB2MQ9H5Q4 396 aaKnown RBP16.36■□□□□ 0.21
SMN2-216ENST00000638794 ACSS2Q9NR19 701 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 PCMTD2Q9NV79 361 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 NLE1Q9NVX2 485 aaPredicted RBP16.36■□□□□ 0.21
SMN2-216ENST00000638794 SNX7Q9UNH6 387 aa16.36■□□□□ 0.21
SMN2-216ENST00000638794 GRID2IPA4D2P6 1211 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
SMN2-216ENST00000638794 METTL18O95568 372 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 RAB40ALP0C0E4 278 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 MSL3P1P0C860 447 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 PVRP15151 417 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 LMAN1P49257 510 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 CCL11P51671 97 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 PGDP52209 483 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 BOP1Q14137 746 aaKnown RBP16.35■□□□□ 0.21
SMN2-216ENST00000638794 POU6F1Q14863 301 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 PARP6Q2NL67 630 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 RAD9BQ6WBX8 426 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 TAS2R42Q7RTR8 314 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 AMIGO1Q86WK6 493 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 PIANPQ8IYJ0 282 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 SYTL1Q8IYJ3 562 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 FAM26EQ8N5C1 309 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 FAM71DQ8N9W8 422 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 ACRBPQ8NEB7 543 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 TRAPPC9Q96Q05 1148 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 NLNQ9BYT8 704 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 KLHL25Q9H0H3 589 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 XKR8Q9H6D3 395 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 MVB12BQ9H7P6 319 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 LRRC40Q9H9A6 602 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 ACTR5Q9H9F9 607 aaPredicted RBP16.35■□□□□ 0.21
SMN2-216ENST00000638794 SYTL2Q9HCH5 934 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 MLXIPLQ9NP71 852 aa16.35■□□□□ 0.21
SMN2-216ENST00000638794 PIH1D1Q9NWS0 290 aaKnown RBP16.35■□□□□ 0.21
SMN2-216ENST00000638794 PCDHGA9Q9Y5G4 932 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms