RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SPATA2Q9UM82 520 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 A0A0U1RQF3 1178 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 TBC1D3BA6NDS4 549 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 CCDC182A6NF36 153 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 G3V2L1 256 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 STK25O00506 426 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 IL7RP16871 459 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 NSG1P42857 185 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 GRB7Q14451 532 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 TAB1Q15750 504 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 SYT16Q17RD7 645 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 LRRC73Q5JTD7 316 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 PDE12Q6L8Q7 609 aaKnown RBP16.37■□□□□ 0.21
SCARB2-210ENST00000638567 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 GPR65Q8IYL9 337 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 TMEM174Q8WUU8 243 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 PTBP2Q9UKA9 531 aaKnown RBP16.37■□□□□ 0.21
SCARB2-210ENST00000638567 PAPSS2O95340 614 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-210ENST00000638567 AGTR2P50052 363 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 SP3Q02447 781 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 DSG4Q86SJ6 1040 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF599Q96NL3 588 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 CPQQ9Y646 472 aa16.37■□□□□ 0.21
SCARB2-210ENST00000638567 LRRC14BA6NHZ5 514 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ERN1O75460 977 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 TNNI3P19429 210 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 HOXA11P31270 313 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ARL4DP49703 201 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 MS4A2Q01362 244 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 MADCAM1Q13477 382 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 PNPLA1Q8N8W4 532 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 DBF4BQ8NFT6 615 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 GTPBP3Q969Y2 492 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 C1GALT1C1Q96EU7 318 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 YTHDF1Q9BYJ9 559 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 RNF208Q9H0X6 261 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 PSME2Q9UL46 239 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 WBP11Q9Y2W2 641 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 GUCY1B2O75343 617 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 HPGDP15428 266 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 PRKACGP22612 351 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 AZGP1P25311 298 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 NFKB2Q00653 900 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 GHRHRQ02643 423 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF423Q2M1K9 1284 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 MPPE1Q53F39 396 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 USP39Q53GS9 565 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ZZZ3Q8IYH5 903 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ZFP28Q8NHY6 868 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 GATA6Q92908 595 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 TIFAQ96CG3 184 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 SLC38A2Q96QD8 506 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 NSUN3Q9H649 340 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ADAMDEC1O15204 470 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 CSNK2BP67870 215 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 PIGGQ5H8A4 983 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 SPANXN4Q5MJ08 99 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 XAGE5Q8WWM1 108 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ZNF607Q96SK3 696 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 SORT1Q99523 831 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 OLFM1Q99784 485 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 FAIM2Q9BWQ8 316 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 DERL2Q9GZP9 239 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 MRM3Q9HC36 420 aaKnown RBP16.36■□□□□ 0.21
SCARB2-210ENST00000638567 TRIM17Q9Y577 477 aa16.36■□□□□ 0.21
SCARB2-210ENST00000638567 ANKRD66B4E2M5 251 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 TBX1O43435 398 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 CCNKO75909 580 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 LEPRP48357 1165 aaKnown RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 CASP9P55211 416 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SRP54P61011 504 aaKnown RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 GCNT6Q5T4J0 391 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 GDF6Q6KF10 455 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 MZT2BQ6NZ67 158 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SERPINA13PQ6UXR4 307 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SLC15A3Q8IY34 581 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 ARNTL2Q8WYA1 636 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 ZUFSPQ96AP4 578 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 TEFMQ96QE5 360 aaKnown RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SPATA5L1Q9BVQ7 753 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 PTGFRNQ9P2B2 879 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 PRORSD1PA6NEY8 169 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 GLTPD2A6NH11 291 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SEPT4O43236 478 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 NPTX1Q15818 432 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 RNF19BQ6ZMZ0 732 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 FBXO22Q8NEZ5 403 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 CCDC3Q9BQI4 270 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 RHBGQ9H310 441 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 TRIM39Q9HCM9 518 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 MARCH4Q9P2E8 410 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 XYLBO75191 536 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 EOMESO95936 686 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 HAPLN1P10915 354 aaPredicted RBP16.35■□□□□ 0.21
SCARB2-210ENST00000638567 CYP2U1Q7Z449 544 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 KDM1BQ8NB78 822 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 STON2Q8WXE9 905 aa16.35■□□□□ 0.21
SCARB2-210ENST00000638567 SEC14L3Q9UDX4 400 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms