RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 TRIM38O00635 465 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 ACOT8O14734 319 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 SGTAO43765 313 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 RNASEH2AO75792 299 aaKnown RBP7.73□□□□□ -1.17
GABRB3-225ENST00000638099 DDX6P26196 483 aaKnown RBP eCLIP7.73□□□□□ -1.17
GABRB3-225ENST00000638099 GRIA3P42263 894 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 ATP6AP1LQ52LC2 224 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 XKR7Q5GH72 579 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 ADNP2Q6IQ32 1131 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 AMIGO2Q86SJ2 522 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 RALGPS2Q86X27 583 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-225ENST00000638099 MMAAQ8IVH4 418 aaKnown RBP7.73□□□□□ -1.17
GABRB3-225ENST00000638099 CBARPQ8N350 705 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-225ENST00000638099 KRTCAP2Q8N6L1 136 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 DCUN1D1Q96GG9 259 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 PPM1MQ96MI6 270 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 ASB2Q96Q27 587 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 CD244Q9BZW8 370 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 SPAG4Q9NPE6 437 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 SDR39U1Q9NRG7 319 aaPredicted RBP7.73□□□□□ -1.17
GABRB3-225ENST00000638099 PKD2L2Q9NZM6 624 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 SLC22A14Q9Y267 594 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 NDUFAF1Q9Y375 327 aa7.73□□□□□ -1.17
GABRB3-225ENST00000638099 ATG2AQ2TAZ0 1938 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PRR23AA6NEV1 266 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 AGAP14A8MT82 685 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 FXYD1O00168 92 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SLC22A2O15244 555 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 MMP20O60882 483 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 WDR47O94967 919 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SNUPNO95149 360 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 OR56A5P0C7T3 313 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 EPORP19235 508 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ATP6V1B2P21281 511 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 AOAHP28039 575 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ADSLP30566 484 aaPredicted RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 VIPR1P32241 457 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 BDKRB1P46663 353 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SOX9P48436 509 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 DDX39BQ13838 428 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 NFYCQ13952 458 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 COL9A2Q14055 689 aaPredicted RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 TCEA2Q15560 299 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PTCHD3Q3KNS1 767 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 C6orf10Q5SRN2 563 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 METTL3Q86U44 580 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SPPL2CQ8IUH8 684 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 C2orf73Q8N5S3 287 aaPredicted RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 RASGEF1AQ8N9B8 481 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PDPRQ8NCN5 879 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PROKR1Q8TCW9 393 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 OSCP1Q8WVF1 389 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 LRTOMTQ8WZ04 291 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ARRDC3Q96B67 414 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ULK4Q96C45 1275 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 AP2M1Q96CW1 435 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PDLIM5Q96HC4 596 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SAMD11Q96NU1 681 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 KXD1Q9BQD3 176 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 RPP25Q9BUL9 199 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 C1QTNF3Q9BXJ4 246 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PLA2G2FQ9BZM2 168 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 CEP44Q9C0F1 390 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ACTL8Q9H568 366 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 AIG1Q9NVV5 245 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 CMTM6Q9NX76 183 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 KCTD5Q9NXV2 234 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ZNF490Q9ULM2 529 aaPredicted RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PPIL1Q9Y3C6 166 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 FAM149AA5PLN7 773 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 TBC1D3BA6NDS4 549 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 LSM1O15116 133 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SPINT1O43278 529 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PRAMEF4O60810 478 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 STK16O75716 305 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SLC22A3O75751 556 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 BCAS2O75934 225 aaPredicted RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 LRATO95237 230 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 HNRNPA1P09651 372 aaKnown RBP eCLIP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 IDO1P14902 403 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 MSH3P20585 1137 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 KCNK10P57789 538 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ST8SIA6P61647 398 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 POLR2LP62875 67 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SELPLGQ14242 412 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 TRIM25Q14258 630 aaKnown RBP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 GK3PQ14409 553 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PCBP2Q15366 365 aaKnown RBP eCLIP7.72□□□□□ -1.17
GABRB3-225ENST00000638099 MAPRE2Q15555 327 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 ZNF805Q5CZA5 627 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PRAMEF9Q5VWM5 478 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 NEK5Q6P3R8 708 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 BRAT1Q6PJG6 821 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 BLOC1S3Q6QNY0 202 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 LIPIQ6XZB0 460 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 SLC15A3Q8IY34 581 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 PQLC1Q8N2U9 271 aa7.72□□□□□ -1.17
GABRB3-225ENST00000638099 BPIFB1Q8TDL5 484 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms