RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 HIST1H2ADP20671 130 aa15.02■□□□□ -0
CLN6-219ENST00000637329 MPSTP25325 297 aa15.02■□□□□ -0
CLN6-219ENST00000637329 PBLDP30039 288 aaPredicted RBP15.02■□□□□ -0
CLN6-219ENST00000637329 CD6P30203 668 aa15.02■□□□□ -0
CLN6-219ENST00000637329 MAT2AP31153 395 aaKnown RBP15.02■□□□□ -0
CLN6-219ENST00000637329 RPL14P50914 215 aaKnown RBP15.02■□□□□ -0
CLN6-219ENST00000637329 ARFIP2P53365 341 aa15.02■□□□□ -0
CLN6-219ENST00000637329 YPEL5P62699 121 aa15.02■□□□□ -0
CLN6-219ENST00000637329 ARHGAP8P85298 464 aa15.02■□□□□ -0
CLN6-219ENST00000637329 PHKG1Q16816 387 aa15.02■□□□□ -0
CLN6-219ENST00000637329 KIAA0895LQ68EN5 471 aa15.02■□□□□ -0
CLN6-219ENST00000637329 DOK6Q6PKX4 331 aa15.02■□□□□ -0
CLN6-219ENST00000637329 AMZ2Q86W34 360 aa15.02■□□□□ -0
CLN6-219ENST00000637329 CHCHD4Q8N4Q1 142 aa15.02■□□□□ -0
CLN6-219ENST00000637329 FAM174AQ8TBP5 190 aa15.02■□□□□ -0
CLN6-219ENST00000637329 SKA2Q8WVK7 121 aaPredicted RBP15.02■□□□□ -0
CLN6-219ENST00000637329 KLK6Q92876 244 aa15.02■□□□□ -0
CLN6-219ENST00000637329 HIST1H2AHQ96KK5 128 aa15.02■□□□□ -0
CLN6-219ENST00000637329 HHIPQ96QV1 700 aa15.02■□□□□ -0
CLN6-219ENST00000637329 HIST1H2AJQ99878 128 aa15.02■□□□□ -0
CLN6-219ENST00000637329 H2AFJQ9BTM1 129 aa15.02■□□□□ -0
CLN6-219ENST00000637329 LGR4Q9BXB1 951 aa15.02■□□□□ -0
CLN6-219ENST00000637329 TMEM120AQ9BXJ8 343 aa15.02■□□□□ -0
CLN6-219ENST00000637329 WSB2Q9NYS7 404 aaPredicted RBP15.02■□□□□ -0
CLN6-219ENST00000637329 GULP1Q9UBP9 304 aa15.02■□□□□ -0
CLN6-219ENST00000637329 MARCOQ9UEW3 520 aaPredicted RBP15.02■□□□□ -0
CLN6-219ENST00000637329 TSR3Q9UJK0 312 aaKnown RBP15.02■□□□□ -0
CLN6-219ENST00000637329 PTBP2Q9UKA9 531 aaKnown RBP15.02■□□□□ -0
CLN6-219ENST00000637329 CYP8B1Q9UNU6 501 aa15.02■□□□□ -0
CLN6-219ENST00000637329 NCF1BA6NI72 391 aaPredicted RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 NCF1CA8MVU1 366 aaPredicted RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 PROB1E7EW31 1015 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 HDAC3O15379 428 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 SLC31A1O15431 190 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 GRID2O43424 1007 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 POP7O75817 140 aaKnown RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 SIX3O95343 332 aaPredicted RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 NCF1P14598 390 aaPredicted RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 PIK3CGP48736 1102 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 AQP5P55064 265 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 ZXDAP98168 799 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 NFATC4Q14934 902 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 CRTC3Q6UUV7 619 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 C6orf89Q6UWU4 347 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 UNC5DQ6UXZ4 953 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 ATG14Q6ZNE5 492 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 CUZD1Q86UP6 607 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 GBP7Q8N8V2 638 aaPredicted RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 MCOLN3Q8TDD5 553 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 DLG3Q92796 817 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 RHBDF1Q96CC6 855 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 TOE1Q96GM8 510 aaKnown RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 SCARF2Q96GP6 870 aaPredicted RBP15.01□□□□□ -0.01
CLN6-219ENST00000637329 EGFL8Q99944 293 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 KCNK13Q9HB14 408 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 WWOXQ9NZC7 414 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 DCTN4Q9UJW0 460 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 PDE10AQ9Y233 779 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 TMEM98Q9Y2Y6 226 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 HS3ST3A1Q9Y663 406 aa15.01□□□□□ -0.01
CLN6-219ENST00000637329 IGHV1OR15-9A0A0B4J2B8 117 aa15□□□□□ -0.01
CLN6-219ENST00000637329 PRAMEF26H0Y7S4 382 aa15□□□□□ -0.01
CLN6-219ENST00000637329 MATN2O00339 956 aa15□□□□□ -0.01
CLN6-219ENST00000637329 E2F3O00716 465 aa15□□□□□ -0.01
CLN6-219ENST00000637329 IGHV4-34P06331 123 aa15□□□□□ -0.01
CLN6-219ENST00000637329 KITP10721 976 aa15□□□□□ -0.01
CLN6-219ENST00000637329 MAP4P27816 1152 aaKnown RBP15□□□□□ -0.01
CLN6-219ENST00000637329 HTR1BP28222 390 aa15□□□□□ -0.01
CLN6-219ENST00000637329 AVPR2P30518 371 aa15□□□□□ -0.01
CLN6-219ENST00000637329 GGT5P36269 586 aa15□□□□□ -0.01
CLN6-219ENST00000637329 PREPP48147 710 aa15□□□□□ -0.01
CLN6-219ENST00000637329 RPIAP49247 311 aa15□□□□□ -0.01
CLN6-219ENST00000637329 PKNOX1P55347 436 aa15□□□□□ -0.01
CLN6-219ENST00000637329 PFN3P60673 137 aa15□□□□□ -0.01
CLN6-219ENST00000637329 CLCQ05315 142 aa15□□□□□ -0.01
CLN6-219ENST00000637329 SPDYAQ5MJ70 313 aa15□□□□□ -0.01
CLN6-219ENST00000637329 SH2D4BQ5SQS7 431 aa15□□□□□ -0.01
CLN6-219ENST00000637329 XKR5Q6UX68 686 aa15□□□□□ -0.01
CLN6-219ENST00000637329 GCNT7Q6ZNI0 430 aa15□□□□□ -0.01
CLN6-219ENST00000637329 LRRC70Q7Z2Q7 622 aa15□□□□□ -0.01
CLN6-219ENST00000637329 YTHDF3Q7Z739 585 aaKnown RBP15□□□□□ -0.01
CLN6-219ENST00000637329 PDZD3Q86UT5 571 aa15□□□□□ -0.01
CLN6-219ENST00000637329 GALNT13Q8IUC8 556 aa15□□□□□ -0.01
CLN6-219ENST00000637329 TMEM145Q8NBT3 493 aa15□□□□□ -0.01
CLN6-219ENST00000637329 OR56A4Q8NGH8 313 aa15□□□□□ -0.01
CLN6-219ENST00000637329 ATL1Q8WXF7 558 aa15□□□□□ -0.01
CLN6-219ENST00000637329 THOC1Q96FV9 657 aaKnown RBP15□□□□□ -0.01
CLN6-219ENST00000637329 RMDN2Q96LZ7 410 aa15□□□□□ -0.01
CLN6-219ENST00000637329 ZNF382Q96SR6 550 aa15□□□□□ -0.01
CLN6-219ENST00000637329 TMEM79Q9BSE2 394 aa15□□□□□ -0.01
CLN6-219ENST00000637329 FZD3Q9NPG1 666 aa15□□□□□ -0.01
CLN6-219ENST00000637329 PNPOQ9NVS9 261 aa15□□□□□ -0.01
CLN6-219ENST00000637329 ARL15Q9NXU5 204 aa15□□□□□ -0.01
CLN6-219ENST00000637329 UTP6Q9NYH9 597 aaKnown RBP15□□□□□ -0.01
CLN6-219ENST00000637329 EIF2B4Q9UI10 523 aaKnown RBP15□□□□□ -0.01
CLN6-219ENST00000637329 APOBEC2Q9Y235 224 aaKnown RBP15□□□□□ -0.01
CLN6-219ENST00000637329 PLXND1Q9Y4D7 1925 aa15□□□□□ -0.01
CLN6-219ENST00000637329 TECTAO75443 2155 aa15□□□□□ -0.01
CLN6-219ENST00000637329 ATG2BQ96BY7 2078 aa14.99□□□□□ -0.01
CLN6-219ENST00000637329 ERICH4A6NGS2 130 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms