RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SSU72Q9NP77 194 aaKnown RBP12.4□□□□□ -0.42
CTSD-208ENST00000636843 CPNE7Q9UBL6 633 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 GPR89AB7ZAQ6 455 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 PRPF4O43172 522 aaKnown RBP eCLIP12.39□□□□□ -0.437e-7■■■□□ 14.8
CTSD-208ENST00000636843 GRID2O43424 1007 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 STK17BO94768 372 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 JCHAINP01591 159 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 ANKRD34CP0C6C1 535 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 GPR89BP0CG08 455 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 KRT15P19012 456 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 STX2P32856 288 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 CD86P42081 329 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 MSH2P43246 934 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 MAPK9P45984 424 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 MAP7Q14244 749 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
CTSD-208ENST00000636843 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 PTRH1Q86Y79 214 aaKnown RBP12.39□□□□□ -0.43
CTSD-208ENST00000636843 SPATA13Q96N96 652 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 SMC6Q96SB8 1091 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 CTRCQ99895 268 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 WDR83Q9BRX9 315 aaKnown RBP12.39□□□□□ -0.43
CTSD-208ENST00000636843 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
CTSD-208ENST00000636843 EIF2B3Q9NR50 452 aaKnown RBP12.39□□□□□ -0.43
CTSD-208ENST00000636843 RAD18Q9NS91 495 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 ATXN10Q9UBB4 475 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 ANAPC2Q9UJX6 822 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 CHMP2BQ9UQN3 213 aa12.39□□□□□ -0.43
CTSD-208ENST00000636843 RRP15Q9Y3B9 282 aaKnown RBP12.39□□□□□ -0.43
CTSD-208ENST00000636843 ZFC3H1O60293 1989 aaKnown RBP12.39□□□□□ -0.43
CTSD-208ENST00000636843 NAV2Q8IVL1 2488 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 LOC101059948A0A1B0GTJ6 334 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 CYSRT1A8MQ03 144 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 POLR1CO15160 346 aaPredicted RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 NKX2-8O15522 239 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 SLC25A14O95258 325 aaPredicted RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 APRTP07741 180 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 MMP2P08253 660 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 MLNP12872 115 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 CREB1P16220 341 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 XRCC1P18887 633 aaPredicted RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 UBE2IP63279 158 aaKnown RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 CDC20Q12834 499 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 CRTC2Q53ET0 693 aaPredicted RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 ANKRD20A2Q5SQ80 823 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 ANKRD20A1Q5TYW2 823 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 ANKRD20A3Q5VUR7 823 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 TIPARPQ7Z3E1 657 aaKnown RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 KDELC2Q7Z4H8 507 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 YTHDF3Q7Z739 585 aaKnown RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 ESX1Q8N693 406 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 PAFAH2Q99487 392 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 ZSCAN5AQ9BUG6 496 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 SPATA16Q9BXB7 569 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 TBC1D10AQ9BXI6 508 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 TRABDQ9H4I3 376 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 ZFYVE1Q9HBF4 777 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 TRIM39Q9HCM9 518 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 APMAPQ9HDC9 416 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 PRDM8Q9NQV8 689 aa12.38□□□□□ -0.43
CTSD-208ENST00000636843 MN1Q10571 1320 aaPredicted RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 UBR5O95071 2799 aaPredicted RBP12.38□□□□□ -0.43
CTSD-208ENST00000636843 MTSS1O43312 755 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 KIAA0754O94854 1291 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 METTL18O95568 372 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 DLGAP3O95886 979 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 PRKAR1AP10644 381 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 ZNF8P17098 575 aaPredicted RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 MAGEA3P43357 314 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 DCDC1P59894 354 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 PPIDQ08752 370 aaKnown RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 AP1B1Q10567 949 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 PDPK2PQ6A1A2 396 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 CAND1Q86VP6 1230 aaKnown RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 CNPY4Q8N129 248 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 CNTD1Q8N815 330 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 LRRN4Q8WUT4 740 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 APOBEC4Q8WW27 367 aaKnown RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 ALKBH8Q96BT7 664 aaKnown RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 SEC16BQ96JE7 1060 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 PLEKHG4BQ96PX9 1271 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 OR2AG1Q9H205 316 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 MAGEE1Q9HCI5 957 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 KLC4Q9NSK0 619 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 NFKBIL1Q9UBC1 381 aaPredicted RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 KLHL3Q9UH77 587 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 IKBKGQ9Y6K9 419 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 FAM169AQ9Y6X4 670 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 IQANK1A0A1B0GTG1 560 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 TCRBV9S1A1TA0A576 114 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 KCNK1O00180 336 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 CHUKO15111 745 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 TOX3O15405 576 aaPredicted RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 VIPP01282 170 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 C9P02748 559 aa12.37□□□□□ -0.43
CTSD-208ENST00000636843 VIMP08670 466 aaKnown RBP12.37□□□□□ -0.43
CTSD-208ENST00000636843 TCN2P20062 427 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms