RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	ANKRD20A3	Q5VUR7	823 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	CERS6	Q6ZMG9	384 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	HOOK3	Q86VS8	718 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	APLF	Q8IW19	511 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	D2HGDH	Q8N465	521 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	ACVR1C	Q8NER5	493 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	OR13C4	Q8NGS5	318 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	LCN9	Q8WX39	176 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	CPT1B	Q92523	772 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	CLIP3	Q96DZ5	547 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	LINC00615	Q96LM1	132 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	RMDN2	Q96LZ7	410 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	ALS2CR12	Q96Q35	445 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	FERD3L	Q96RJ6	166 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	FAM118B	Q9BPY3	351 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	TBL1Y	Q9BQ87	522 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	TLR10	Q9BXR5	811 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	OSBPL8	Q9BZF1	889 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	SRMS	Q9H3Y6	488 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	ACSS2	Q9NR19	701 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	KCND1	Q9NSA2	647 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	TLK1	Q9UKI8	766 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	PLAA	Q9Y263	795 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	TEX15	Q9BXT5	2789 aa		10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	USP9Y	O00507	2555 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	USP9X	Q93008	2570 aa	Predicted RBP	10.09	□□□□□ -0.79
UBE3A-223	ENST00000631247	CCDC66	A2RUB6	948 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	GOLGA6L9	A6NEM1	432 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	ARGFX	A6NJG6	315 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	DNAJB5	O75953	348 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	LCA5L	O95447	670 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	ATP1B2	P14415	290 aa	Predicted RBP	10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	MC4R	P32245	332 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	PREP	P48147	710 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	PRLHR	P49683	370 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	KPNA2	P52292	529 aa	Known RBP	10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	RWDD2B	P57060	319 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	GSDMD	P57764	484 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	OLIG2	Q13516	323 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	SEMA5A	Q13591	1074 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	ZRANB3	Q5FWF4	1079 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	FBXO38	Q6PIJ6	1188 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	RANBP10	Q6VN20	620 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	ARHGEF18	Q6ZSZ5	1173 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	SNX20	Q7Z614	316 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	NXPE1	Q8N323	547 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	TC2N	Q8N9U0	490 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	OR4E2	Q8NGC2	313 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	CCDC110	Q8TBZ0	833 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	N4BP2L2	Q92802	583 aa	Predicted RBP	10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	ZNF501	Q96CX3	271 aa	Predicted RBP	10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	SPATA13	Q96N96	652 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	RUFY1	Q96T51	708 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	SLC25A23	Q9BV35	468 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	FAM96A	Q9H5X1	160 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	C1GALT1	Q9NS00	363 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	ANKMY1	Q9P2S6	941 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	POMT2	Q9UKY4	750 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	SNX7	Q9UNH6	387 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	FARSA	Q9Y285	508 aa	Known RBP	10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	EFR3B	Q9Y2G0	817 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	PCDHA3	Q9Y5H8	950 aa		10.08	□□□□□ -0.8
UBE3A-223	ENST00000631247	SPTAN1	Q13813	2472 aa	Known RBP	10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	SLC9B1P1	A6NJY1	282 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	TTLL8	A6PVC2	850 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247		K7EM74	188 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	MEN1	O00255	615 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	CCL22	O00626	93 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	DDX3Y	O15523	660 aa	Known RBP	10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	VPS4B	O75351	444 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	PTPN7	P35236	360 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	ADRA1A	P35348	466 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	ZNF140	P52738	457 aa	Predicted RBP	10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	MLLT10	P55197	1068 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	CHAF1B	Q13112	559 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	GPS2	Q13227	327 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	IL10RA	Q13651	578 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	GPR33	Q49SQ1	333 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	IZUMO3	Q5VZ72	239 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	CPZ	Q66K79	652 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	SARM1	Q6SZW1	724 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	TAS2R42	Q7RTR8	314 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	RETREG3	Q86VR2	466 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	FAM26E	Q8N5C1	309 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	PRR7	Q8TB68	274 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	GORASP1	Q9BQQ3	440 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	HGH1	Q9BTY7	390 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	CHST8	Q9H2A9	424 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	COG4	Q9H9E3	785 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	SYTL2	Q9HCH5	934 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	LATS2	Q9NRM7	1088 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	ZDHHC3	Q9NYG2	299 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	VPS4A	Q9UN37	437 aa		10.07	□□□□□ -0.8
UBE3A-223	ENST00000631247	BTRC	Q9Y297	605 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms