RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CYHR1Q6ZMK1 362 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF765Q7L2R6 523 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 DET1Q7L5Y6 550 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 RAB44Q7Z6P3 723 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 WDR75Q8IWA0 830 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 RGL4Q8IZJ4 473 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ZBTB2Q8N680 514 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CCNYL1Q8N7R7 359 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 PIWIL2Q8TC59 973 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 DLG3Q92796 817 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 EXT2Q93063 718 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 GLYATL1Q969I3 302 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 PHF21BQ96EK2 531 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 L3HYPDHQ96EM0 354 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 EBF4Q9BQW3 602 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM120AQ9BXJ8 343 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 GSTO2Q9H4Y5 243 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 GULP1Q9UBP9 304 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 RNF112Q9ULX5 631 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 LHX6Q9UPM6 363 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CDYLQ9Y232 598 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 A0A1W2PP55 124 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 TMEM202A6NGA9 273 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CCT8L1PA6NM43 557 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 UBFD1O14562 309 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 TSPAN6O43657 245 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 NPHS1O60500 1241 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 KIAA0754O94854 1291 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 AP2A2O94973 939 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 SIX3O95343 332 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 DNTTP04053 509 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 IMPDH1P20839 514 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 MPSTP25325 297 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 AOAHP28039 575 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 SERPINB5P36952 375 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ARFIP2P53365 341 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CTSCP53634 463 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 FGL2Q14314 439 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 TRIP6Q15654 476 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 GALNTL6Q49A17 601 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF658BQ4V348 819 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 UNC50Q53HI1 259 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF678Q5SXM1 525 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 TRPM8Q7Z2W7 1104 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 PHYKPLQ8IUZ5 450 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 VRK3Q8IV63 474 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 MYO1HQ8N1T3 1032 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 BEND7Q8N7W2 519 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 RASGEF1AQ8N9B8 481 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 PLA2G15Q8NCC3 412 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CADM4Q8NFZ8 388 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 MAPK15Q8TD08 544 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ADAMTS14Q8WXS8 1223 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 PRR11Q96HE9 360 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 SIKE1Q9BRV8 207 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CD93Q9NPY3 652 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 KCTD5Q9NXV2 234 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 KLHL42Q9P2K6 505 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ZDHHC2Q9UIJ5 367 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ADAMTS6Q9UKP5 1117 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 KLK13Q9UKR3 277 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ZFR2Q9UPR6 939 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 APOBEC2Q9Y235 224 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ASB1Q9Y576 335 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ATXN2Q99700 1313 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 A0A1B0GTL3 188 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 A0A1B0GTW7 788 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 SUPT3HB4E1H0 165 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 ANKRD65E5RJM6 399 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 PPP6CO00743 305 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 INPP4BO15327 924 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 SUPT3HO75486 399 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 RNASEH2AO75792 299 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 TM7SF2O76062 418 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 SNUPNO95149 360 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 PCDH8O95206 1070 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 JUNP05412 331 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 GFAPP14136 432 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 CD6P30203 668 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 GPR1P46091 355 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 HERVK_113P63132 956 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 PFKFB4Q16877 469 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 FBXO48Q5FWF7 155 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 VWA5B1Q5TIE3 1220 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 SEL1L3Q68CR1 1132 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 RAET1GQ6H3X3 334 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 CCDC121Q6ZUS5 278 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 FRMD7Q6ZUT3 714 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 YTHDF3Q7Z739 585 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 ADAMTSL2Q86TH1 951 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 TRIM74Q86UV6 250 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 NLRP8Q86W28 1048 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 CHCHD4Q8N4Q1 142 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 DEFB119Q8N690 84 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 GANCQ8TET4 914 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 DNASE2BQ8WZ79 361 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 SKA1Q96BD8 255 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 CNDP1Q96KN2 507 aa9.31□□□□□ -0.92
PDLIM5-223ENST00000627587 HSPA12BQ96MM6 686 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms