RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 PIM3Q86V86 326 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 KCNMB4Q86W47 210 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 LRRC6Q86X45 466 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 ANKMY2Q8IV38 441 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 SFRP1Q8N474 314 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 CEP112Q8N8E3 955 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 LRRC39Q96DD0 335 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 CCDC97Q96F63 343 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 FERD3LQ96RJ6 166 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 TRIM56Q9BRZ2 755 aaKnown RBP7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 FOXP3Q9BZS1 431 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 COG4Q9H9E3 785 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 RDH14Q9HBH5 336 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 POT1Q9NUX5 634 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 NOP53Q9NZM5 478 aaKnown RBP7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 IL1RAPL1Q9NZN1 696 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 WHRNQ9P202 907 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 TXNDC16Q9P2K2 825 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 CRYL1Q9Y2S2 319 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 PCDHB1Q9Y5F3 818 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 ST14Q9Y5Y6 855 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 HEBP2Q9Y5Z4 205 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 MRFAP1Q9Y605 127 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 CFAP20Q9Y6A4 193 aaKnown RBP7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 AK5Q9Y6K8 562 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 FAM169AQ9Y6X4 670 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 COLEC10Q9Y6Z7 277 aa7.07□□□□□ -1.28
NPLOC4-221ENST00000625705 C17orf113A0A1B0GUU1 675 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 H3BMM5 538 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 TMX2-CTNND1H3BSU7 103 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PPM1DO15297 605 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 KDM1AO60341 852 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 RASSF9O75901 435 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 CPNE6O95741 557 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 FURINP09958 794 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 JMJD7P0C870 316 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ERVK-10P10266 1014 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 MTHFD1P11586 935 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 TYRP1P17643 537 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 CHRM3P20309 590 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PSMA3P25788 255 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 NDUFS1P28331 727 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 FMO4P31512 558 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ELK3P41970 407 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 MAGEA3P43357 314 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PLTPP55058 493 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 INHBCP55103 352 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 GPLD1P80108 840 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 SHC2P98077 582 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PLOD1Q02809 727 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 GUCY2DQ02846 1103 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 HSPA14Q0VDF9 509 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 RPA4Q13156 261 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 SEMA3AQ14563 771 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 RPE65Q16518 533 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 HSP90AA5PQ58FG0 334 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 NKAIN2Q5VXU1 208 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 METRNLQ641Q3 311 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 DUS1LQ6P1R4 473 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ABRAXAS1Q6UWZ7 409 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 WASH2PQ6VEQ5 465 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 OTOAQ7RTW8 1153 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ZNF572Q7Z3I7 529 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 C11orf96Q7Z7L8 435 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 SYT9Q86SS6 491 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 CD163Q86VB7 1156 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 MARCH9Q86YJ5 346 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PALM2Q8IXS6 379 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 RBM12BQ8IXT5 1001 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 LMNTD2Q8IXW0 634 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ZBED8Q8IZ13 594 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 KRT222Q8N1A0 295 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 FBXO36Q8NEA4 188 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 CFAP61Q8NHU2 1237 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PYROXD1Q8WU10 500 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 NCSTNQ92542 709 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 FAM136AQ96C01 138 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 CERS2Q96G23 380 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 SGSM3Q96HU1 749 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 LINC00615Q96LM1 132 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 RMDN2Q96LZ7 410 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PWWP2AQ96N64 755 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 TCF12Q99081 682 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 EBNA1BP2Q99848 306 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 HGH1Q9BTY7 390 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 TSPAN10Q9H1Z9 355 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 EPB41L1Q9H4G0 881 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 SAYSD1Q9NPB0 183 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 WASH6PQ9NQA3 447 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 FBXO6Q9NRD1 293 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 IARS2Q9NSE4 1012 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 INTS10Q9NVR2 710 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ZFATQ9P243 1243 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 MTRF1LQ9UGC7 380 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 KLHL3Q9UH77 587 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 ASF1AQ9Y294 204 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 WDR37Q9Y2I8 494 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 MSRB2Q9Y3D2 182 aa7.06□□□□□ -1.28
NPLOC4-221ENST00000625705 PRSS21Q9Y6M0 314 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms