RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 EIF2B4Q9UI10 523 aaKnown RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 MED16Q9Y2X0 877 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 POLR3HQ9Y535 204 aaPredicted RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 PTCH2Q9Y6C5 1203 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 UBA6A0AVT1 1052 aaPredicted RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 ELOVL7A1L3X0 281 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 LCHNA4D1U4 455 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 ASB14A6NK59 587 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 CLDN24A6NM45 220 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 E9PAM4 449 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 IFRD1O00458 451 aaPredicted RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 BTN3A1O00481 513 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 SCELO95171 688 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 MSH3P20585 1137 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 TRPC1P48995 793 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 HTR6P50406 440 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 MVKQ03426 396 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 PON2Q15165 354 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 SMN1Q16637 294 aaKnown RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 BRMS1LQ5PSV4 323 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 UBXN11Q5T124 520 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 SLX4IPQ5VYV7 408 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 LRRC8DQ7L1W4 858 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 CYP4Z1Q86W10 505 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 OR52B6Q8NGF0 335 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 OR13C4Q8NGS5 318 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 BLOC1S5Q8TDH9 187 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 PROX1Q92786 737 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 NCLNQ969V3 563 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 PYCR2Q96C36 320 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 DHRS1Q96LJ7 313 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 NACA2Q9H009 215 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 ZBTB20Q9HC78 741 aaPredicted RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 DCAF13Q9NV06 445 aaKnown RBP13.87□□□□□ -0.19
LDB3-209ENST00000623056 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.87□□□□□ -0.19
LDB3-209ENST00000623056 PKP3Q9Y446 797 aa13.87□□□□□ -0.19
LDB3-209ENST00000623056 METTL15A6NJ78 407 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 KLK8O60259 260 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 GUCY1B2O75343 617 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 RPP40O75818 363 aaKnown RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 MOCS2O96007 188 aaPredicted RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 LCKP06239 509 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 GTF2E2P29084 291 aaKnown RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 FMO4P31512 558 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 CLK3P49761 638 aaKnown RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 STC1P52823 247 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 HUNKP57058 714 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 CXCR4P61073 352 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 TRAF3Q13114 568 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 KIAA0040Q15053 153 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 PLEKHG6Q3KR16 790 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 MARC1Q5VT66 337 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 RSBN1Q5VWQ0 802 aaPredicted RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 CAPN13Q6MZZ7 669 aaPredicted RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 DNAJC14Q6Y2X3 702 aaPredicted RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 CCDC103Q8IW40 242 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 OR52E4Q8NGH9 312 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 CHAC2Q8WUX2 184 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 SLC13A3Q8WWT9 602 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 BARD1Q99728 777 aaKnown RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 C6orf62Q9GZU0 229 aaPredicted RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 MAGIXQ9H6Y5 334 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 VNN3Q9NY84 501 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 COL4A4P53420 1690 aaPredicted RBP13.86□□□□□ -0.19
LDB3-209ENST00000623056 OR2A25A4D2G3 310 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 E2F3O00716 465 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 PTGESO14684 152 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 FAM20BO75063 409 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 LHX1P48742 406 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 SCNN1GP51170 649 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 ERVPABLB-1P60509 514 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 IL1RL1Q01638 556 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 LAPTM4AQ15012 233 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 LETMD1Q6P1Q0 360 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 GPR149Q86SP6 731 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 OR4L1Q8NH43 312 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 TMEM40Q8WWA1 233 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 HMCESQ96FZ2 354 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 TSPAN18Q96SJ8 248 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 EPS8L2Q9H6S3 715 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 TAS2R13Q9NYV9 303 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 RBPJLQ9UBG7 517 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 NUDT5Q9UKK9 219 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 IPPQ9Y573 584 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 ANKRD36A6QL64 1941 aa13.86□□□□□ -0.19
LDB3-209ENST00000623056 A0A0G2JLL6 359 aaPredicted RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 LOC285095A0A1B0GVY8 99 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 IDH3BO43837 385 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 CCNKO75909 580 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 SERPINA1P01009 418 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 OGNP20774 298 aaKnown RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 NRIP1P48552 1158 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 CLK1P49759 484 aaKnown RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 HK3P52790 923 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 TUBA1BP68363 451 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 KEAP1Q14145 624 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 NR6A1Q15406 480 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms