RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TEAD4Q15561 434 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 SBSNQ6UWP8 590 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 PHACTR4Q8IZ21 702 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 ASB11Q8WXH4 323 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 ZC3H10Q96K80 434 aaKnown RBP17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 FOPNLQ96NB1 174 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 ZMYND15Q9H091 742 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 OR52A5Q9H2C5 316 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 TCEAL2Q9H3H9 227 aaPredicted RBP17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 TRNAU1APQ9NX07 287 aaKnown RBP17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 DNAJC28Q9NX36 388 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 UTP6Q9NYH9 597 aaKnown RBP17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 KLF15Q9UIH9 416 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 PCDHGA2Q9Y5H1 932 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 A0A1B0GTW7 788 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 PRR5-ARHGAP8B1AHC4 643 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 UBXN8O00124 270 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 GALR2O43603 387 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 SMIM24O75264 130 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 MATN4O95460 622 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 SLC35G4P0C7Q5 338 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 IDSP22304 550 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 RPL10P27635 214 aaKnown RBP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 ALDH3A1P30838 453 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 BLKP51451 505 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 CLCNKAP51800 687 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 SP140Q13342 867 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 PRR23BQ6ZRT6 265 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 UBE2R2Q712K3 238 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 PDZD3Q86UT5 571 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 NUDCD3Q8IVD9 361 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 C10orf107Q8IVU9 208 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 SPDYE1Q8NFV5 336 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 WWP1Q9H0M0 922 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 SUSD2Q9UGT4 822 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 ST14Q9Y5Y6 855 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 ZNF318Q5VUA4 2279 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 NEMP2A6NFY4 417 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 SLC16A5O15375 505 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 BIRC5O15392 142 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 DLX3O60479 287 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 SNX2O60749 519 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 TPBGLP0DKB5 382 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 JUNDP17535 347 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 ATP5F1P24539 256 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 AK4P27144 223 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 MAPK9P45984 424 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 ILF3Q12906 894 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 PHKG1Q16816 387 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 PPP1R3AQ16821 1122 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 CCL4L1Q8NHW4 92 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 PIGKQ92643 395 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 DLG3Q92796 817 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 CAAP1Q9H8G2 361 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 TMEM74BQ9NUR3 256 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 CD274Q9NZQ7 290 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 APOBEC3BQ9UH17 382 aaKnown RBP17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 PILRBQ9UKJ0 227 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 OARD1Q9Y530 152 aa17.41■□□□□ 0.38
PTCHD3-202ENST00000622555 ARHGEF17Q96PE2 2063 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 CACNA1EQ15878 2313 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 A0A1B0GVT2 93 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 NCF1BA6NI72 391 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 PRR19A6NJB7 356 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 PDZK1P1A8MUH7 402 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 NCF1CA8MVU1 366 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 GFYI3L273 518 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 IFRD1O00458 451 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 PSIP1O75475 530 aaKnown RBP17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 CTSEP14091 401 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 GFAPP14136 432 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 NCF1P14598 390 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 CYP2A7P20853 494 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 ACADLP28330 430 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 ACTR1BP42025 376 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 ACTR1AP61163 376 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 TGFBIQ15582 683 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 SLC30A9Q6PML9 568 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 RMDN2Q96LZ7 410 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 SLC12A9Q9BXP2 914 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 TRIM54Q9BYV2 358 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 CCDC134Q9H6E4 229 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 PARVBQ9HBI1 364 aa17.4■□□□□ 0.38
PTCHD3-202ENST00000622555 GMNCA6NCL1 334 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 PABPN1LA6NDY0 278 aaKnown RBP17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 A8MT66 165 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 FAM107AO95990 144 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 CATP04040 527 aaKnown RBP17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 CSF2P04141 144 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 S100BP04271 92 aaPredicted RBP17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 ENO2P09104 434 aaPredicted RBP17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 MTHFD2P13995 350 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 NME1P15531 152 aaKnown RBP17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 MAP4P27816 1152 aaKnown RBP17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 NUBP1P53384 320 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 SYT12Q8IV01 421 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 PPP1R14CQ8TAE6 165 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 MCOLN3Q8TDD5 553 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 CKAP2Q8WWK9 683 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 SREK1Q8WXA9 508 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms