RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ACSL4O60488 711 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RAMP2O60895 175 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ANXA6P08133 673 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SBK3P0C264 359 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ARSAP15289 507 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CHRM3P20309 590 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 TACR2P21452 398 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 PSMB9P28065 219 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ELK4P28324 431 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CHRNA4P43681 627 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CCT8P50990 548 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CYP4F8P98187 520 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 PRKG2Q13237 762 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 DAG1Q14118 895 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 MLC1Q15049 377 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RBM48Q5RL73 367 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ZNF678Q5SXM1 525 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 IRAK1BP1Q5VVH5 260 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ARHGAP36Q6ZRI8 547 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 VASH1Q7L8A9 365 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 UBE2Q1Q7Z7E8 422 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 LDB1Q86U70 411 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ADGRG5Q8IZF4 528 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 EID3Q8N140 333 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 STAG3L4Q8TBR4 150 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CHPT1Q8WUD6 406 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 IGSF8Q969P0 613 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RNF38Q9H0F5 515 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 TLR9Q9NR96 1032 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 GIMAP2Q9UG22 337 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 C3orf18Q9UK00 162 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 VWA8A3KMH1 1905 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 LINC01553A4QN01 128 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 G3V2T6 193 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MATN3O15232 486 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MAN1A2O60476 641 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 TULP3O75386 442 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 NDUFS3O75489 264 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 NADKO95544 446 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 EFEMP2O95967 443 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CYBBP04839 570 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CA3P07451 260 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ZDHHC11BP0C7U3 371 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 RHOQP17081 205 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 VARSP26640 1264 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 OXTRP30559 389 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CLK1P49759 484 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 EEFSECP57772 596 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CREB5Q02930 508 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CYP2A13Q16696 494 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 TSTD2Q5T7W7 516 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MARC1Q5VT66 337 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SPESP1Q6UW49 350 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CNTN4Q8IWV2 1026 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MRPL43Q8N983 215 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MINDY2Q8NBR6 621 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 FBXO30Q8TB52 745 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 PSMG2Q969U7 264 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CEP295NLQ96MC4 621 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ZNF347Q96SE7 839 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 TRIM8Q9BZR9 551 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CD274Q9NZQ7 290 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 GMPR2Q9P2T1 348 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 NUP205Q92621 2012 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 A0A1W2PP18 115 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM221A6NGB7 291 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SERPINB7O75635 380 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SIX3O95343 332 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 DLGAP3O95886 979 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CST1P01037 141 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CAPN3P20807 821 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 KCNA5P22460 613 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 FSHRP23945 695 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC6A2P23975 617 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 HTR7P34969 479 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 CD86P42081 329 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MTHFRP42898 656 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ALDH3A2P51648 485 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 POLR2JP52435 117 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 LSM3P62310 102 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 RPS24P62847 133 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 RING1Q06587 406 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 LCP2Q13094 533 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ZNF235Q14590 738 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 C9orf50Q5SZB4 431 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SCIMPQ6UWF3 145 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 LARP4Q71RC2 724 aaKnown RBP eCLIP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SPRED2Q7Z698 418 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MICU2Q8IYU8 434 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SPPL3Q8TCT6 385 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 OVCA2Q8WZ82 227 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ACDQ96AP0 544 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ERLEC1Q96DZ1 483 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ASPSCR1Q9BZE9 553 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ARNT2Q9HBZ2 717 aa6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 MRM3Q9HC36 420 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ZNF334Q9HCZ1 680 aaPredicted RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 SARS2Q9NP81 518 aaKnown RBP6.87□□□□□ -1.31
SRGAP3-213ENST00000618999 ASAH2Q9NR71 780 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms