RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 H7C0S8 307 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 GREM1O60565 184 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 VPS4BO75351 444 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 VPS26AO75436 327 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CPNE6O95741 557 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 EFEMP2O95967 443 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 IRF1P10914 325 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 IL7RP16871 459 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 HOXB9P17482 250 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CTPS1P17812 591 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 GGT1P19440 569 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CD9P21926 228 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 LPOP22079 712 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 IL10P22301 178 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 DCKP27707 260 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CORO1AP31146 461 aaKnown RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 HSPA7P48741 367 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ARSFP54793 590 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CDH4P55283 916 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 IL2P60568 153 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 HMGCS1Q01581 520 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 SEMG2Q02383 582 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 PIGFQ07326 219 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 GRIK2Q13002 908 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 SLC14A1Q13336 389 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 DCTN2Q13561 401 aaKnown RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 RPS6KA2Q15349 733 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CRY1Q16526 586 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 DPY19L1Q2PZI1 675 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CTU2Q2VPK5 515 aaKnown RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 LRRC23Q53EV4 343 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ZRANB3Q5FWF4 1079 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 OTUD3Q5T2D3 398 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 TMTC4Q5T4D3 741 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 GPR107Q5VW38 600 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 MFSD14CQ5VZR4 134 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 RNF219Q5W0B1 726 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 NCEH1Q6PIU2 408 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 IL27RAQ6UWB1 636 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 SUSD1Q6UWL2 747 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 DNAJC14Q6Y2X3 702 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 GPR141Q7Z602 305 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 PATL1Q86TB9 770 aaKnown RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 TMEM150AQ86TG1 271 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ZSWIM9Q86XI8 627 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 EGFL6Q8IUX8 553 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 HID1Q8IV36 788 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 NKAPQ8N5F7 415 aaKnown RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ZNF548Q8NEK5 533 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 OR56A4Q8NGH8 313 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ADAMTS19Q8TE59 1207 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 GTF2H4Q92759 462 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 TMBIM1Q969X1 311 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ALG14Q96F25 216 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 VPS50Q96JG6 964 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 RNF145Q96MT1 663 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CGREF1Q99674 301 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 LRRC3Q9BY71 257 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 TRIM15Q9C019 465 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 AMBRA1Q9C0C7 1298 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 POLR1BQ9H9Y6 1135 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 CXorf21Q9HAI6 301 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 SMURF2Q9HAU4 748 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 PAK1IP1Q9NWT1 392 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 SMPD4Q9NXE4 827 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 RNF186Q9NXI6 227 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 TUBA8Q9NY65 449 aaPredicted RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 VNN3Q9NY84 501 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 HACD3Q9P035 362 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 TRMT6Q9UJA5 497 aaKnown RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 PTBP2Q9UKA9 531 aaKnown RBP4.24□□□□□ -1.73
SEC22B-202ENST00000618538 MKL2Q9ULH7 1088 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ZNF711Q9Y462 761 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 OR51B4Q9Y5P0 310 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 PIKFYVEQ9Y2I7 2098 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 SCN5AQ14524 2016 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 PLXNB3Q9ULL4 1909 aa4.24□□□□□ -1.73
SEC22B-202ENST00000618538 ILVBLA1L0T0 632 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 SYCE1LA8MT33 242 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 ARNTLO00327 626 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 GFRA2O00451 464 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 FFAR3O14843 346 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 GPR42O15529 346 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 SMAD6O43541 496 aaKnown RBP4.23□□□□□ -1.73
SEC22B-202ENST00000618538 CRCPO75575 148 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 MLYCDO95822 493 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 GUCA1CO95843 209 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 LDLRP01130 860 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 RHOCP08134 193 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 CDH1P12830 882 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 UGT1A1P22309 533 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 UGT1A4P22310 534 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 JAK1P23458 1154 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 PTPN6P29350 595 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 UGT1A3P35503 534 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 UGT1A5P35504 534 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 TTPAP49638 278 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 CLCN4P51793 760 aa4.23□□□□□ -1.73
SEC22B-202ENST00000618538 ADARP55265 1226 aaKnown RBP4.23□□□□□ -1.73
SEC22B-202ENST00000618538 RPL38P63173 70 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms