RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 WRAP53Q9BUR4 548 aaKnown RBP12.17□□□□□ -0.46
CIITA-212ENST00000618207 YIPF2Q9BWQ6 316 aa12.17□□□□□ -0.46
CIITA-212ENST00000618207 NUSAP1Q9BXS6 441 aaKnown RBP12.17□□□□□ -0.46
CIITA-212ENST00000618207 CD244Q9BZW8 370 aa12.17□□□□□ -0.46
CIITA-212ENST00000618207 MRGBPQ9NV56 204 aa12.17□□□□□ -0.46
CIITA-212ENST00000618207 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
CIITA-212ENST00000618207 COQ6Q9Y2Z9 468 aa12.17□□□□□ -0.46
CIITA-212ENST00000618207 A0A1W2PP18 115 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 TMEM202A6NGA9 273 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 A6NHS1 94 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 KPNA3O00505 521 aaPredicted RBP12.16□□□□□ -0.46
CIITA-212ENST00000618207 CTSLP07711 333 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 CD9P21926 228 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 TPP2P29144 1249 aaPredicted RBP12.16□□□□□ -0.46
CIITA-212ENST00000618207 NNMTP40261 264 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 RHDQ02161 417 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 CAMK1Q14012 370 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 TTLL9Q3SXZ7 439 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 ELMSAN1Q6PJG2 1045 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 MACC1Q6ZN28 852 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 SLC22A15Q8IZD6 547 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 ROPN1LQ96C74 230 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 ACTR8Q9H981 624 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 PCDH12Q9NPG4 1184 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 GID8Q9NWU2 228 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 SARDHQ9UL12 918 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 ZNF490Q9ULM2 529 aaPredicted RBP12.16□□□□□ -0.46
CIITA-212ENST00000618207 MAFFQ9ULX9 164 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 PDE10AQ9Y233 779 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 A0A1W2PQ67 120 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 SAC3D1A6NKF1 404 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 UPK3BL1B0FP48 263 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 UPK3BL2E5RIL1 263 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 CASQ2O14958 399 aaPredicted RBP12.16□□□□□ -0.46
CIITA-212ENST00000618207 VPS4BO75351 444 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 SEC22BO75396 215 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 STK16O75716 305 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 PRR35P0CG20 571 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 EPB42P16452 691 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
CIITA-212ENST00000618207 MTPNP58546 118 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 CDKL1Q00532 357 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 GRIN2CQ14957 1233 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 PDK3Q15120 406 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 CYP20A1Q6UW02 462 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 SPATA19Q7Z5L4 167 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 KIAA2013Q8IYS2 634 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 PDPRQ8NCN5 879 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 ELMO1Q92556 727 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 EZH1Q92800 747 aaPredicted RBP12.16□□□□□ -0.46
CIITA-212ENST00000618207 HEPHQ9BQS7 1158 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 RIOK2Q9BVS4 552 aaKnown RBP12.16□□□□□ -0.46
CIITA-212ENST00000618207 AP4B1Q9Y6B7 739 aa12.16□□□□□ -0.46
CIITA-212ENST00000618207 PLXNB3Q9ULL4 1909 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 BBIP1A8MTZ0 92 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 LSM1O15116 133 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 ULK1O75385 1050 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 MATN4O95460 622 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 OR56A5P0C7T3 313 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 HSPA8P11142 646 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 OXTRP30559 389 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 ZFP36L2P47974 494 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 ABRQ12979 859 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 TSTA3Q13630 321 aaPredicted RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 RCAN2Q14206 197 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 ZXDCQ2QGD7 858 aaPredicted RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 OGFOD2Q6N063 350 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 IYDQ6PHW0 289 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 METTL3Q86U44 580 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 SFTPA1Q8IWL2 248 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 C7orf61Q8IZ16 206 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 TMEM102Q8N9M5 508 aaPredicted RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 PIP4K2CQ8TBX8 421 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 GFM2Q969S9 779 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 FAM83DQ9H4H8 585 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 COQ10BQ9H8M1 238 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 TRANK1O15050 2925 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 LINC01553A4QN01 128 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 K7EPI3 171 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 WDR47O94967 919 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 ANXA5P08758 320 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 PRKG2Q13237 762 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 ZNF77Q15935 545 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 C8orf82Q6P1X6 216 aaPredicted RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 EFL1Q7Z2Z2 1120 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 CBARPQ8N350 705 aaPredicted RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 KRTCAP2Q8N6L1 136 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 LMNTD1Q8N9Z9 388 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 SEPHS2Q99611 448 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 SLC29A1Q99808 456 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 GPATCH1Q9BRR8 931 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 ALG2Q9H553 416 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 SLC52A3Q9NQ40 469 aa12.15□□□□□ -0.46
CIITA-212ENST00000618207 MRPL40Q9NQ50 206 aaKnown RBP12.15□□□□□ -0.46
CIITA-212ENST00000618207 CNOT6Q9ULM6 557 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms