RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 TMEM110Q86TL2 294 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 PHYKPLQ8IUZ5 450 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 LIX1LQ8IVB5 337 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 ANKRD20A12PQ8NF67 263 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 OR11G2Q8NGC1 345 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 RND1Q92730 232 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 FAXDC2Q96IV6 333 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 C1orf74Q96LT6 269 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 SMIM14Q96QK8 99 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 MED15Q96RN5 788 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 LLPHQ9BRT6 129 aaKnown RBP6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 ABCG8Q9H221 673 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 BLZF1Q9H2G9 400 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 KCTD10Q9H3F6 313 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 LRTM1Q9HBL6 345 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 ARFGAP3Q9NP61 516 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 YAE1D1Q9NRH1 226 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 SLC22A11Q9NSA0 550 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 DHCR7Q9UBM7 475 aaKnown RBP6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 KIAA1257Q9ULG3 409 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 NEU3Q9UQ49 428 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 DNAJC16Q9Y2G8 782 aa6.59□□□□□ -1.35
SCAMP1-206ENST00000618166 MBD3L4A6NDZ8 208 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 NPIPB15A6NHN6 443 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 MBD3L5A6NJ08 208 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 PDZK1P1A8MUH7 402 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FAM72CH0Y354 149 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 LINC01387J3KSC0 135 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 TRAFD1O14545 582 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 RAMP2O60895 175 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 SMPD2O60906 423 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 PAEPP09466 180 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 PTGER1P34995 402 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 SOX18P35713 384 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 ACADSBP45954 432 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 LMAN1P49257 510 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 MXI1P50539 228 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 NR1H2P55055 460 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 NUP107P57740 925 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 HMGN5P82970 282 aaKnown RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 PMPCAQ10713 525 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FILIP1LQ4L180 1135 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 CBWD6Q4V339 395 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 RAB6CQ53S08 254 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 INO80DQ53TQ3 878 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 CBWD3Q5JTY5 395 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 BRMS1LQ5PSV4 323 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 CBWD5Q5RIA9 395 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FAM72AQ5TYM5 149 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FAM72DQ6L9T8 149 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 TIGD7Q6NT04 549 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 RWDD4Q6NW29 188 aaKnown RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 CRTC3Q6UUV7 619 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 CCDC73Q6ZRK6 1079 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FAM183BPQ6ZVS7 135 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FAM72BQ86X60 149 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 PAF1Q8N7H5 531 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 AVL9Q8NBF6 648 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 GOLGA5Q8TBA6 731 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 AP2M1Q96CW1 435 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 NSUN5Q96P11 429 aaKnown RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 TBCBQ99426 244 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 AMBRA1Q9C0C7 1298 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 KLHL25Q9H0H3 589 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 RAB6CQ9H0N0 254 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 MAGEH1Q9H213 219 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FANCEQ9HB96 536 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 KLHL1Q9NR64 748 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 POT1Q9NUX5 634 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 CNOT6Q9ULM6 557 aaKnown RBP6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 LIMCH1Q9UPQ0 1083 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 WDR37Q9Y2I8 494 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FRMD4BQ9Y2L6 1034 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 PCDHB4Q9Y5E5 795 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 CLIC4Q9Y696 253 aa6.58□□□□□ -1.36
SCAMP1-206ENST00000618166 FAM170AA1A519 330 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 OR5K3A6NET4 321 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 E7EQ34 232 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 HCRTR1O43613 425 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 HSF2BPO75031 334 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 DAB1O75553 588 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 ERBB2P04626 1255 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 FAM157CP0CG43 387 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 SERPINA4P29622 427 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 VIPR1P32241 457 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 SULT1E1P49888 294 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 NEK4P51957 841 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 TMPRSS15P98073 1019 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 DPTQ07507 201 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 ADCY2Q08462 1091 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 MTA1Q13330 715 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 PDCLQ13371 301 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 CAPRIN1Q14444 709 aaKnown RBP6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 FLYWCH1Q4VC44 716 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 ZNF766Q5HY98 468 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 UBAP2Q5T6F2 1119 aaKnown RBP6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 TRIM72Q6ZMU5 477 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 SRLQ86TD4 932 aa6.57□□□□□ -1.36
SCAMP1-206ENST00000618166 MCATQ8IVS2 390 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms