RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FFAR3O14843 346 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 KPNA5O15131 536 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 GPR42O15529 346 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 TSPAN6O43657 245 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 FTH1P02794 183 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 ADRB3P13945 408 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 CAPN3P20807 821 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 ERVK-8P63133 956 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 RAB30Q15771 203 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 ZXDCQ2QGD7 858 aaPredicted RBP16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 VPS26BQ4G0F5 336 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 C6orf136Q5SQH8 315 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 AAGABQ6PD74 315 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 MMAAQ8IVH4 418 aaKnown RBP16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 YAF2Q8IY57 180 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 FNDC5Q8NAU1 212 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 PPP2R3CQ969Q6 453 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 CHFRQ96EP1 664 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 TEX37Q96LM6 180 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 RNF11Q9Y3C5 154 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 SZT2Q5T011 3432 aa16.98■□□□□ 0.31
PCDHGC3-205ENST00000617641 H0Y858 1186 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 AREL1O15033 823 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 SYNCRIPO60506 623 aaKnown RBP16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 ENO2P09104 434 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 EPB42P16452 691 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 TCN1P20061 433 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 ME2P23368 584 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 VHLP40337 213 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 ATP6AP1LQ52LC2 224 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 FAM156AQ8NDB6 213 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 SUSD6Q92537 303 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 SLC39A3Q9BRY0 314 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 TRIM54Q9BYV2 358 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 LOC730098B7Z3J9 87 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 GFYI3L273 518 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 K7ESM1 405 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 MMP20O60882 483 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 RECQL5O94762 991 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 MS4A2Q01362 244 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 ELP6Q0PNE2 266 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 TMEM115Q12893 351 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 EGFLAMQ63HQ2 1017 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 TMEM184AQ6ZMB5 413 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 TRIM74Q86UV6 250 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 UCMAQ8WVF2 138 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 ASZ1Q8WWH4 475 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 P2RY13Q9BPV8 354 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 NMRK1Q9NWW6 199 aa16.97■□□□□ 0.31
PCDHGC3-205ENST00000617641 UNC80Q8N2C7 3258 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 KAT7O95251 611 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 SOD1P00441 154 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 EPHX1P07099 455 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 RPSAP08865 295 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 HIST1H2AGP0C0S8 130 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 C6P13671 934 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 EPORP19235 508 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 HIST1H2ADP20671 130 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 PSMD8P48556 350 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 ATXN3P54252 364 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 CDKL1Q00532 357 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 FLOT2Q14254 428 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 NR6A1Q15406 480 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 CDKL4Q5MAI5 379 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 METTL2BQ6P1Q9 378 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 LILRA3Q8N6C8 439 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 PPP1R16AQ96I34 528 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 HIST1H2AHQ96KK5 128 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 ZNF570Q96NI8 536 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 HIST1H2AJQ99878 128 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 H2AFJQ9BTM1 129 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 BRINP2Q9C0B6 783 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 SLC32A1Q9H598 525 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 PRSS16Q9NQE7 514 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 DYRK4Q9NR20 520 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 FARSBQ9NSD9 589 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 KLQ9UEF7 1012 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 CROTQ9UKG9 612 aa16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 CNOT6Q9ULM6 557 aaKnown RBP16.96■□□□□ 0.31
PCDHGC3-205ENST00000617641 BBIP1A8MTZ0 92 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 TRIM38O00635 465 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLCO2B1O94956 709 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 PBLDP30039 288 aaPredicted RBP16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 GGT5P36269 586 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 PREPP48147 710 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 UFM1P61960 85 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 SP140Q13342 867 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 SYTL3Q4VX76 610 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 C8orf82Q6P1X6 216 aaPredicted RBP16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 TMEM220Q6QAJ8 160 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 BLOC1S3Q6QNY0 202 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 PARM1Q6UWI2 310 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 RNF111Q6ZNA4 994 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 CYP2U1Q7Z449 544 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 KBTBD6Q86V97 674 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 FGF14Q92915 247 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 NUS1Q96E22 293 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 LRCH3Q96II8 777 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 NTMT1Q9BV86 223 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 IL1RL2Q9HB29 575 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms