RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NLRP9Q7RTR0 991 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SLC9B2Q86UD5 537 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 RASGRP3Q8IV61 690 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 PLD5Q8N7P1 536 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SPERTQ8NA61 448 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 CCNYQ8ND76 341 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 BRSK1Q8TDC3 778 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.4□□□□□ -1.06
GPC6-202ENST00000617456 SCAMP4Q969E2 229 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SH3KBP1Q96B97 665 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TADA1Q96BN2 335 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 IMP4Q96G21 291 aaKnown RBP8.4□□□□□ -1.06
GPC6-202ENST00000617456 OLFM3Q96PB7 478 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 VAT1Q99536 393 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 CCT7Q99832 543 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 ZSCAN5AQ9BUG6 496 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TBC1D10AQ9BXI6 508 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 SLC25A51Q9H1U9 297 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 ABCG8Q9H221 673 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 ARFGAP3Q9NP61 516 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 PKD2L2Q9NZM6 624 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 IL1RAPL1Q9NZN1 696 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 TBC1D29Q9UFV1 150 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 ZNHIT2Q9UHR6 403 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 KCNK6Q9Y257 313 aa8.4□□□□□ -1.06
GPC6-202ENST00000617456 R3HDM2Q9Y2K5 976 aaKnown RBP8.4□□□□□ -1.06
GPC6-202ENST00000617456 MED13Q9UHV7 2174 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 A0A0A6YYK5 440 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 C2orf81A6NN90 581 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 AKR1B15C9JRZ8 316 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 H0Y3Z8 333 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 APOL1O14791 398 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 PSTPIP1O43586 416 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 KCNJ13O60928 360 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 DNAJC8O75937 253 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 NDUFA10O95299 355 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 STAMBPO95630 424 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 JCHAINP01591 159 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 HLA-DQB2P05538 268 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 ACP5P13686 325 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TYRP1P17643 537 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 ATP5DP30049 168 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 CDC25BP30305 580 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 CCNG1P51959 295 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 SH3BP2P78314 561 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 GSTM4Q03013 218 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 GBE1Q04446 702 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 SLC10A2Q12908 348 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 CHAF1BQ13112 559 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TBX2Q13207 712 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 RIPK1Q13546 671 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 NADK2Q4G0N4 442 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TEX44Q53QW1 395 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 ODF2Q5BJF6 829 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 HENMT1Q5T8I9 393 aaKnown RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 NDUFAF5Q5TEU4 345 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 IYDQ6PHW0 289 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 NT5DC3Q86UY8 548 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 PLXDC1Q8IUK5 500 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 MAIP1Q8WWC4 291 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 IFT81Q8WYA0 676 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 RAPGEF5Q92565 580 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 CFAP36Q96G28 342 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TGM7Q96PF1 710 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TRAPPC9Q96Q05 1148 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 SMIM14Q96QK8 99 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 OR6C1Q96RD1 312 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 NR1H4Q96RI1 486 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 TRIB3Q96RU7 358 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 AGAP2Q99490 1192 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 C19orf43Q9BQ61 176 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 HERPUD2Q9BSE4 406 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TRIM55Q9BYV6 548 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 CARD9Q9H257 536 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 FAM83DQ9H4H8 585 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TRABDQ9H4I3 376 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 ACTR5Q9H9F9 607 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 UCK1Q9HA47 277 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 ZFYVE1Q9HBF4 777 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 SARS2Q9NP81 518 aaKnown RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 SIDT1Q9NXL6 827 aaKnown RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 LUZP4Q9P127 313 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 LNPEPQ9UIQ6 1025 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 CHKBQ9Y259 395 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.39□□□□□ -1.07
GPC6-202ENST00000617456 PCYT1BQ9Y5K3 369 aaPredicted RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 ANKRD17O75179 2603 aaKnown RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 DOPEY1Q5JWR5 2465 aa8.39□□□□□ -1.07
GPC6-202ENST00000617456 TNRC6AQ8NDV7 1962 aaKnown RBP8.39□□□□□ -1.07
GPC6-202ENST00000617456 LRBAP50851 2863 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 KIR2DS5A0A0G2JLQ3 304 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 A0A0G2JNG1 304 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 C1orf232A0A0U1RR37 186 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 A0A1W2PRQ8 180 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 A6NCN8 305 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 KIR2DS3K7RE56 304 aa8.38□□□□□ -1.07
GPC6-202ENST00000617456 IDH3BO43837 385 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms