RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CARS2Q9HA77 564 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 SPATS2LQ9NUQ6 558 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 ARGLU1Q9NWB6 273 aaPredicted RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 SMOXQ9NWM0 555 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 NSMCE4AQ9NXX6 385 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 VPS9D1Q9Y2B5 631 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 HECTD1Q9ULT8 2610 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 TCRBV9S1A1TA0A576 114 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 UBA6A0AVT1 1052 aaPredicted RBP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 HGSO14964 777 aaPredicted RBP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 VEGFDO43915 354 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 CCL4P13236 92 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 ACRV1P26436 265 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 ARNTP27540 789 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 OR1D5P58170 312 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 ILF3Q12906 894 aaKnown RBP eCLIP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 CLCA4Q14CN2 919 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 DBN1Q16643 649 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 ZNF574Q6ZN55 896 aaPredicted RBP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 MICALCLQ6ZW33 695 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 LDB1Q86U70 411 aaPredicted RBP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 NRROSQ86YC3 692 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 PIANPQ8IYJ0 282 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 RCBTB1Q8NDN9 531 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 DDHD1Q8NEL9 900 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 CAVIN3Q969G5 261 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 CCDC74BQ96LY2 380 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 CYTH2Q99418 400 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 CCDC77Q9BR77 488 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 SLC25A18Q9H1K4 315 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 OR2AG1Q9H205 316 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 TRIM39Q9HCM9 518 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 GEMIN8Q9NWZ8 242 aaKnown RBP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 MARCH4Q9P2E8 410 aaPredicted RBP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 FBXO5Q9UKT4 447 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 CNOT6Q9ULM6 557 aaKnown RBP14.57□□□□□ -0.08
UBXN1-218ENST00000616865 TMEM98Q9Y2Y6 226 aa14.57□□□□□ -0.08
UBXN1-218ENST00000616865 TRBV5-4A0A0C4DH59 114 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 IGHV5-10-1A0A0J9YXX1 117 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 CCDC151A5D8V7 595 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 RHPN2P1A8MT19 583 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 ZW10O43264 779 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 RIPK2O43353 540 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 MTX2O75431 263 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 CDK14O94921 469 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 ZNF7P17097 686 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 ALDH4A1P30038 563 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 SLC1A2P43004 574 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 ATP1A2P50993 1020 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 CTBP1Q13363 440 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 NAB1Q13506 487 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 ITIH4Q14624 930 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 ZNF648Q5T619 568 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 ZNF449Q6P9G9 518 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 MARK2Q7KZI7 788 aaKnown RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 DET1Q7L5Y6 550 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 CILP2Q8IUL8 1156 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 PPM1NQ8N819 430 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 JPH3Q8WXH2 748 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 PMEPA1Q969W9 287 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 COX14Q96I36 57 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 TAAR9Q96RI9 348 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 CCDC68Q9H2F9 335 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 PLAC1Q9HBJ0 212 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 FBXO6Q9NRD1 293 aaPredicted RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 INTS10Q9NVR2 710 aaKnown RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 TRNAU1APQ9NX07 287 aaKnown RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 MOCS1Q9NZB8 636 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 TAAR2Q9P1P5 351 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 TMPRSS11EQ9UL52 423 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 PCDHGA3Q9Y5H0 932 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 OAS3Q9Y6K5 1087 aaKnown RBP14.56□□□□□ -0.08
UBXN1-218ENST00000616865 IKBKGQ9Y6K9 419 aa14.56□□□□□ -0.08
UBXN1-218ENST00000616865 AGAP14A8MT82 685 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 FUCA1P04066 466 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 CEACAM5P06731 702 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 ABHD2P08910 425 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 FGF3P11487 239 aaPredicted RBP14.55□□□□□ -0.08
UBXN1-218ENST00000616865 AK4P27144 223 aaPredicted RBP14.55□□□□□ -0.08
UBXN1-218ENST00000616865 CD1CP29017 333 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 NSG1P42857 185 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 GPR3P46089 330 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 GNPDA1P46926 289 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 LIMK2P53671 638 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 TMEM115Q12893 351 aaPredicted RBP14.55□□□□□ -0.08
UBXN1-218ENST00000616865 TRA2AQ13595 282 aaKnown RBP eCLIP14.55□□□□□ -0.083e-8■■■□□ 15
UBXN1-218ENST00000616865 SEMA3AQ14563 771 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 UAP1Q16222 522 aaPredicted RBP14.55□□□□□ -0.08
UBXN1-218ENST00000616865 KLHL38Q2WGJ6 581 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 KBTBD12Q3ZCT8 623 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 TEDDM1Q5T9Z0 273 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 PTRHD1Q6GMV3 140 aaKnown RBP14.55□□□□□ -0.08
UBXN1-218ENST00000616865 KIAA0408Q6ZU52 694 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 CYS1Q717R9 158 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 STRA8Q7Z7C7 330 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 ADGRG6Q86SQ4 1221 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 SLC26A11Q86WA9 606 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 DENND6AQ8IWF6 608 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 NAGSQ8N159 534 aa14.55□□□□□ -0.08
UBXN1-218ENST00000616865 C2CD4AQ8NCU7 369 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms