RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 NXNL1Q96CM4 212 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 OPTCQ9UBM4 332 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 SORCS3Q9UPU3 1222 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 MKI67P46013 3256 aaKnown RBP10.68□□□□□ -0.7
FAM3A-221ENST00000612856 POLEQ07864 2286 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.68□□□□□ -0.7
FAM3A-221ENST00000612856 TCRBV5S1A1TA0A578 114 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 H3BM21 787 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 CCRL2O00421 344 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 SERPINI2O75830 405 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 ATE1O95260 518 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 CCNCP24863 283 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 ENPEPQ07075 957 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 POC5Q8NA72 575 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 P2RY13Q9BPV8 354 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 GPR174Q9BXC1 333 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 TPK1Q9H3S4 243 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 SFXN1Q9H9B4 322 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 SNX15Q9NRS6 342 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 LOXHD1Q8IVV2 1947 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 B4DGG1 531 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TK2O00142 265 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 RAD51BO15315 384 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TRIM13O60858 407 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 AP2A1O95782 977 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TYRP1P17643 537 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 CYP2A7P20853 494 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 MPSTP25325 297 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 NR4A2P43354 598 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 GNPDA1P46926 289 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 CARD16Q5EG05 197 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 GAREM2Q75VX8 874 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SUN5Q8TC36 379 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SELENOMQ8WWX9 145 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 STARD8Q92502 1023 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 LPGAT1Q92604 370 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 QKIQ96PU8 341 aaKnown RBP eCLIP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 FEM1AQ9BSK4 669 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 POLMQ9NP87 494 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 VPS45Q9NRW7 570 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 PHPT1Q9NRX4 125 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ZDHHC7Q9NXF8 308 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 DNMT3BQ9UBC3 853 aaKnown RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 DCDC2Q9UHG0 476 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 RBBP6Q7Z6E9 1792 aaKnown RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 H2AFYO75367 372 aaKnown RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 PRSS56P0CW18 603 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 GGT5P36269 586 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SLC6A11P48066 632 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TTPAP49638 278 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 MS4A2Q01362 244 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 NRG1Q02297 640 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 IL10RBQ08334 325 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 RUNX3Q13761 415 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SF3B4Q15427 424 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■■■□ 20.2
FAM3A-221ENST00000612856 KCNJ8Q15842 424 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TIGD2Q4W5G0 525 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TANGO2Q6ICL3 276 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 GK5Q6ZS86 529 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 LINC01465Q8N7H1 131 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ADAMTS19Q8TE59 1207 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 VMP1Q96GC9 406 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ACE2Q9BYF1 805 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 GBA3Q9H227 469 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 FANCEQ9HB96 536 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 RC3H2Q9HBD1 1191 aaKnown RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 HMG20AQ9NP66 347 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 B4GALT6Q9UBX8 382 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 CAB39Q9Y376 341 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 PCDHGA3Q9Y5H0 932 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 KRBA1A5PL33 1030 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 NPEPPSL1A6NEC2 478 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 DENRO43583 198 aaKnown RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 RBP1P09455 135 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TAS2R39P59534 338 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 PSME3P61289 254 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 FOXM1Q08050 763 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 CHRNA6Q15825 494 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ZBTB6Q15916 424 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TEDDM1Q5T9Z0 273 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 GDPD4Q6W3E5 623 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ADGRG6Q86SQ4 1221 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 PIM3Q86V86 326 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 KBTBD6Q86V97 674 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF761Q86XN6 746 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 MICU2Q8IYU8 434 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TDHQ8IZJ6 230 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 DHRSXQ8N5I4 330 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 NIPA2Q8N8Q9 360 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 PSD4Q8NDX1 1056 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 FAR2Q96K12 515 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 MIEF1Q9NQG6 463 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SPATA6Q9NWH7 488 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 PADI4Q9UM07 663 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SNPHO15079 494 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 IDH3BO43837 385 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 WDR47O94967 919 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 MAPK8P45983 427 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms