RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SPARCL1Q14515 664 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 ZNF658BQ4V348 819 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-215ENST00000612337 PLEKHS1Q5SXH7 462 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 DSELQ8IZU8 1212 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 CPT1BQ92523 772 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 FERD3LQ96RJ6 166 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 CHST8Q9H2A9 424 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 VPS37BQ9H9H4 285 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 DUSP10Q9Y6W6 482 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 UTP20O75691 2785 aaKnown RBP17.27■□□□□ 0.35
SSBP1-215ENST00000612337 PIKFYVEQ9Y2I7 2098 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 GSAPA4D1B5 854 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 BTNL10A8MVZ5 291 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 H7C0S8 307 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 MEN1O00255 615 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 IFRD1O00458 451 aaPredicted RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 CCL22O00626 93 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 RAB40ALP0C0E4 278 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 MSL3P1P0C860 447 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 ACRV1P26436 265 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 PRDX3P30048 256 aaKnown RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 CDKN1CP49918 316 aaPredicted RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 ABRQ12979 859 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 RPA4Q13156 261 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 PRAMEF17Q5VTA0 474 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 CPZQ66K79 652 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 AADACL2Q6P093 401 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 SERPINA9Q86WD7 417 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 ATCAYQ86WG3 371 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 ALG3Q92685 438 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 DNAJC1Q96KC8 554 aaKnown RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 PANX2Q96RD6 677 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 SLC25A23Q9BV35 468 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 PITPNM3Q9BZ71 974 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 TFB2MQ9H5Q4 396 aaKnown RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 MVB12BQ9H7P6 319 aa17.26■□□□□ 0.35
SSBP1-215ENST00000612337 PCDHGA9Q9Y5G4 932 aaKnown RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 TNRC6AQ8NDV7 1962 aaKnown RBP17.26■□□□□ 0.35
SSBP1-215ENST00000612337 SOWAHDA6NJG2 315 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 BTN3A3O00478 584 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 BTN3A1O00481 513 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
SSBP1-215ENST00000612337 RORAP35398 523 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 PGDP52209 483 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 ZRANB3Q5FWF4 1079 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 ZNF789Q5FWF6 425 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 KCTD11Q693B1 232 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 LCN10Q6JVE6 187 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 ZNF449Q6P9G9 518 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 TMTC1Q8IUR5 882 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 FAM26EQ8N5C1 309 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 ENDOVQ8N8Q3 282 aaKnown RBP17.25■□□□□ 0.35
SSBP1-215ENST00000612337 OR52E1Q8NGJ3 308 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 OR1L3Q8NH93 324 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 ADAMTS17Q8TE56 1095 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 NLNQ9BYT8 704 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 ING2Q9H160 280 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 MLXIPLQ9NP71 852 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 ACSS2Q9NR19 701 aa17.25■□□□□ 0.35
SSBP1-215ENST00000612337 NLE1Q9NVX2 485 aaPredicted RBP17.25■□□□□ 0.35
SSBP1-215ENST00000612337 SPTBN1Q01082 2364 aaKnown RBP17.24■□□□□ 0.35
SSBP1-215ENST00000612337 ARGFXA6NJG6 315 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 TMEM150CB9EJG8 249 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 DDX3YO15523 660 aaKnown RBP17.24■□□□□ 0.35
SSBP1-215ENST00000612337 MAP3K7O43318 606 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 GSTM1P09488 218 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 ST6GAL1P15907 406 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 PDHA2P29803 388 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 PREPP48147 710 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 CCL11P51671 97 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 GSTM4Q03013 218 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 CHAF1BQ13112 559 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 BOP1Q14137 746 aaKnown RBP17.24■□□□□ 0.35
SSBP1-215ENST00000612337 PARP6Q2NL67 630 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 PAPD7Q5XG87 772 aaKnown RBP17.24■□□□□ 0.35
SSBP1-215ENST00000612337 ARHGEF18Q6ZSZ5 1173 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 TAS2R42Q7RTR8 314 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 AMIGO1Q86WK6 493 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 LRRC57Q8N9N7 239 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 CLIP3Q96DZ5 547 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 LRRC40Q9H9A6 602 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 ACTR5Q9H9F9 607 aaPredicted RBP17.24■□□□□ 0.35
SSBP1-215ENST00000612337 PCMTD2Q9NV79 361 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 TCFL5Q9UL49 500 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 SNX7Q9UNH6 387 aa17.24■□□□□ 0.35
SSBP1-215ENST00000612337 REXO2Q9Y3B8 237 aaKnown RBP17.24■□□□□ 0.35
SSBP1-215ENST00000612337 GOLGA6L9A6NEM1 432 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 AP2A2O94973 939 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 CAPN1P07384 714 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 PRSS56P0CW18 603 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 CYP2A7P20853 494 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 PTGIRP43119 386 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 LMAN1P49257 510 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 CACNG1Q06432 222 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 SYTL1Q8IYJ3 562 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 ADGRF3Q8IZF5 1079 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 CLDN19Q8N6F1 224 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 FAM71DQ8N9W8 422 aa17.23■□□□□ 0.35
SSBP1-215ENST00000612337 TTC13Q8NBP0 860 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms