RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 HOXB6P17509 224 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CORO1AP31146 461 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CRHR1P34998 444 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 NR1H2P55055 460 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 IL18Q14116 193 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 TIGD6Q17RP2 521 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 OR52L1Q8NGH7 329 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 BRI3BPQ8WY22 251 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 PROX1Q92786 737 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 FEM1CQ96JP0 617 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 PSKH2Q96QS6 385 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 EDARQ9UNE0 448 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 URB1O60287 2271 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 YJEFN3A6XGL0 299 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CRXO43186 299 aaPredicted RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 TSPAN19P0C672 248 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 TUBG1P23258 451 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC7A1P30825 629 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 RPL19P84098 196 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 PPA1Q15181 289 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SF1Q15637 639 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CLNKQ7Z7G1 428 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SFRP1Q8N474 314 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 OR8K5Q8NH50 307 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 C1orf216Q8TAB5 229 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SCAMP5Q8TAC9 235 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CAPNS2Q96L46 248 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 AIFM2Q9BRQ8 373 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CDH19Q9H159 772 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 IMP3Q9NV31 184 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 NKX1-2Q9UD57 310 aaPredicted RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 LGALS13Q9UHV8 139 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CIB4A0PJX0 185 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ASNA1O43681 348 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 EIF4EP06730 217 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 TOP3AQ13472 1001 aaPredicted RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 LYPLAL1Q5VWZ2 237 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 APTXQ7Z2E3 356 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 OR4K2Q8NGD2 314 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 MIEF2Q96C03 454 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 BPIFA2Q96DR5 249 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 TEKT5Q96M29 485 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 WDR55Q9H6Y2 383 aaPredicted RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 MEAF6Q9HAF1 191 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ARHGEF4Q9NR80 690 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 TBC1D30Q9Y2I9 924 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 PCDHGA8Q9Y5G5 932 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 AKAP12Q02952 1782 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 E9PAM4 449 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 H3BSH0 61 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SGTAO43765 313 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 PGAM2P15259 253 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 IFNGR2P38484 337 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 RPL3P39023 403 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 EIF1AXP47813 144 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 DSC2Q02487 901 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF234Q14588 700 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 VPS26BQ4G0F5 336 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 RNASEH2BQ5TBB1 312 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF605Q86T29 641 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ZNF554Q86TJ5 538 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 DBF4BQ8NFT6 615 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CIDEBQ9UHD4 219 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 IDO1P14902 403 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 GDF10P55107 478 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 RPL38P63173 70 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SRYQ05066 204 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SLC1A5Q15758 541 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 DGUOKQ16854 277 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ATG14Q6ZNE5 492 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 JAZF1Q86VZ6 243 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SMG7Q92540 1137 aaKnown RBP9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 RCN3Q96D15 328 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SCLYQ96I15 445 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 BTN2A3PQ96KV6 586 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 C12orf66Q96MD2 445 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 RNF39Q9H2S5 420 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 IKZF2Q9UKS7 526 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ADAM18Q9Y3Q7 739 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 SNAP91O60641 907 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CDH3P22223 829 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ITGA1P56199 1179 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CREMQ03060 361 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 CA9Q16790 459 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 TAC4Q86UU9 113 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 ENKURQ8TC29 256 aa9.34□□□□□ -0.91
SRGAP2B-204ENST00000612199 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.92
SRGAP2B-204ENST00000612199 MAGEC1O60732 1142 aa9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 SHOX2O60902 331 aaPredicted RBP9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 AP2A1O95782 977 aa9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 PSMD8P48556 350 aa9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 GLUD2P49448 558 aa9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 SEPHS1P49903 392 aa9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 YBEYP58557 167 aaPredicted RBP9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 ERVK-21P61565 698 aa9.33□□□□□ -0.92
SRGAP2B-204ENST00000612199 MAPK11Q15759 364 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms