RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 LMLNQ96KR4 655 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 TXLNGYQ9BZA5 131 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SIRPGQ9P1W8 387 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 RPL26L1Q9UNX3 145 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 KCNK6Q9Y257 313 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 MYRFQ9Y2G1 1151 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SAMHD1Q9Y3Z3 626 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 COLEC10Q9Y6Z7 277 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ZCWPW2A0A1B0GU75 182 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 LOC730098B7Z3J9 87 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 STX16-NPEPL1H3BU86 382 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SMAD6O43541 496 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 TNFAIP8O95379 198 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 PGM3O95394 542 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 TGFB1P01137 390 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 HNRNPA1P09651 372 aaKnown RBP eCLIP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 FGF3P11487 239 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 LEPRP48357 1165 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 MTPNP58546 118 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 RUNX1T1Q06455 604 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF789Q5FWF6 425 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SLC30A9Q6PML9 568 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 CDK20Q8IZL9 346 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 OR4F6Q8NGB9 312 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 TCEAL4Q96EI5 215 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 NUSAP1Q9BXS6 441 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 GRIP2Q9C0E4 1043 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 PCDHAC1Q9H158 963 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ALG2Q9H553 416 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 MAGEE1Q9HCI5 957 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 S100A14Q9HCY8 104 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 POMPQ9Y244 141 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 SH3GLB1Q9Y371 365 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 OR10H1Q9Y4A9 318 aa7.15□□□□□ -1.27
CSDE1-218ENST00000610726 ATXN2Q99700 1313 aaKnown RBP7.15□□□□□ -1.27
CSDE1-218ENST00000610726 FAM20BO75063 409 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CHRM1P11229 460 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 EN2P19622 333 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ADSLP30566 484 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 BDKRB1P46663 353 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CASP9P55211 416 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 TMEM115Q12893 351 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ACSBG2Q5FVE4 666 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 XKR4Q5GH76 650 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 IRGCQ6NXR0 463 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 AAGABQ6PD74 315 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CASP12Q6UXS9 341 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF783Q6ZMS7 281 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 TSPAN33Q86UF1 283 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZCCHC10Q8TBK6 192 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 TFGQ92734 400 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SMARCD2Q92925 531 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 KHSRPQ92945 711 aaKnown RBP eCLIP7.14□□□□□ -1.272e-7■■■■□ 20
CSDE1-218ENST00000610726 REXO5Q96IC2 774 aaKnown RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ANKRD27Q96NW4 1050 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 NSUN5Q96P11 429 aaKnown RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SMIM14Q96QK8 99 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 OLFM1Q99784 485 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 DERL2Q9GZP9 239 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SLC32A1Q9H598 525 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ARMC7Q9H6L4 198 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 MRM3Q9HC36 420 aaKnown RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 FAM53CQ9NYF3 392 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 PCDH10Q9P2E7 1040 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SLC7A8Q9UHI5 535 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 FBXW2Q9UKT8 454 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CDV3Q9UKY7 258 aaKnown RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ANGPT4Q9Y264 503 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 MAP4K5Q9Y4K4 846 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF780BQ9Y6R6 833 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SSC5DA1L4H1 1573 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 TCRBV5S1A1TA0A578 114 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 LRRC14BA6NHZ5 514 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SUV39H1O43463 412 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CNOT3O75175 753 aaKnown RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 TULP3O75386 442 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF8P17098 575 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CDH3P22223 829 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 BUD31P41223 144 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ASMTP46597 345 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 DGKQP52824 942 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 C21orf59P57076 290 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ERVK-8P63133 956 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 UBE3AQ05086 875 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ANO7Q6IWH7 933 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 BHLHB9Q6PI77 547 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 FRMD7Q6ZUT3 714 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 GATAD2AQ86YP4 633 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 OFCC1Q8IZS5 231 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 AADATQ8N5Z0 425 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CHST14Q8NCH0 376 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 PHF10Q8WUB8 498 aaKnown RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 MYLIPQ8WY64 445 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF641Q96N77 438 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-218ENST00000610726 CCM2Q9BSQ5 444 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 SLC46A2Q9BY10 475 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 NKX2-4Q9H2Z4 354 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 RAPGEFL1Q9UHV5 662 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF232Q9UNY5 417 aa7.14□□□□□ -1.27
CSDE1-218ENST00000610726 KLHL20Q9Y2M5 609 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms