RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 XPAP23025 273 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 AKT1P31749 480 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 ZFP36L2P47974 494 aaKnown RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 KRT6CP48668 564 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 DGKGP49619 791 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 AQP4P55087 323 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 EEFSECP57772 596 aaKnown RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 UFM1P61960 85 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 RALGDSQ12967 914 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 KCNC3Q14003 757 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 INPP5AQ14642 412 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 DHCR24Q15392 516 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 TLR1Q15399 786 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 AP5B1Q2VPB7 878 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 EML3Q32P44 896 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 GGTA1PQ4G0N0 100 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 AASDHQ4L235 1098 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 TMEM215Q68D42 235 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 LCN8Q6JVE9 175 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 UBE2R2Q712K3 238 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 GRASPQ7Z6J2 395 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 PTRH1Q86Y79 214 aaKnown RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 NRSN1Q8IZ57 195 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 TMEM102Q8N9M5 508 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 GLB1L3Q8NCI6 653 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 DDHD1Q8NEL9 900 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 PROKR1Q8TCW9 393 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 OSCP1Q8WVF1 389 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 UCMAQ8WVF2 138 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 ASZ1Q8WWH4 475 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 SAMD11Q96NU1 681 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 VPS35Q96QK1 796 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 PCDHAC1Q9H158 963 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 EBF3Q9H4W6 596 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 COPS7BQ9H9Q2 264 aaPredicted RBP11.72□□□□□ -0.53
USP6NL-206ENST00000609853 ARL15Q9NXU5 204 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 CCL27Q9Y4X3 112 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 WNT6Q9Y6F9 365 aa11.72□□□□□ -0.53
USP6NL-206ENST00000609853 GFYI3L273 518 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 PAPLNO95428 1278 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 LYNP07948 512 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 CISD3P0C7P0 127 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ADH5P11766 374 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 TIMP2P16035 220 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 SYN1P17600 705 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ST8SIA6P61647 398 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF33BQ06732 778 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 CAMK1Q14012 370 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ABRAXAS2Q15018 415 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF284Q2VY69 593 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 C18orf21Q32NC0 220 aaPredicted RBP11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ARSIQ5FYB1 569 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 LDLRAP1Q5SW96 308 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 HENMT1Q5T8I9 393 aaKnown RBP11.71□□□□□ -0.54
USP6NL-206ENST00000609853 CACHD1Q5VU97 1274 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 IL23RQ5VWK5 629 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 CAPRIN2Q6IMN6 1127 aaKnown RBP11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ERAP2Q6P179 960 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 CYP20A1Q6UW02 462 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 UBE2Q1Q7Z7E8 422 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 LILRA2Q8N149 483 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 MCOLN3Q8TDD5 553 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 USP7Q93009 1102 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 TMEM125Q96AQ2 219 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 MIEF2Q96C03 454 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ZSWIM3Q96MP5 696 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 ZBTB18Q99592 522 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 PKP2Q99959 881 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 PCDH12Q9NPG4 1184 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 DUS2Q9NX74 493 aaKnown RBP11.71□□□□□ -0.54
USP6NL-206ENST00000609853 PDE10AQ9Y233 779 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 AP3M1Q9Y2T2 418 aa11.71□□□□□ -0.54
USP6NL-206ENST00000609853 TTC34A8MYJ7 566 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 HNRNPRO43390 633 aaKnown RBP11.7□□□□□ -0.54
USP6NL-206ENST00000609853 RNASEH2AO75792 299 aaKnown RBP11.7□□□□□ -0.54
USP6NL-206ENST00000609853 GPIP06744 558 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 BMP1P13497 986 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 CEBPBP17676 345 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 GNPDA1P46926 289 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 HTR6P50406 440 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 SEMG2Q02383 582 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 FOLH1Q04609 750 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 SCIMPQ6UWF3 145 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 HID1Q8IV36 788 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 MARVELD2Q8N4S9 558 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 DNAJB8Q8NHS0 232 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 SLC39A3Q9BRY0 314 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 C1orf50Q9BV19 199 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 IL1RL2Q9HB29 575 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 CCM2LQ9NUG4 571 aaPredicted RBP11.7□□□□□ -0.54
USP6NL-206ENST00000609853 CMTM6Q9NX76 183 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 DLGAP2Q9P1A6 1054 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
USP6NL-206ENST00000609853 TMPRSS11EQ9UL52 423 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 PDE4DIPQ5VU43 2346 aa11.7□□□□□ -0.54
USP6NL-206ENST00000609853 SERTM1A2A2V5 107 aa11.69□□□□□ -0.54
USP6NL-206ENST00000609853 ASPDHA6ND91 283 aa11.69□□□□□ -0.54
USP6NL-206ENST00000609853 LOC730098B7Z3J9 87 aa11.69□□□□□ -0.54
USP6NL-206ENST00000609853 NPIPB8E9PQR5 432 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms