RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 IL17FQ96PD4 163 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 PRPF18Q99633 342 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 MFSD1Q9H3U5 465 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 ATP13A3Q9H7F0 1226 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 PCDH12Q9NPG4 1184 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 AASDHPPTQ9NRN7 309 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 SH3BP4Q9P0V3 963 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 MYO1GB0I1T2 1018 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 EIF3FO00303 357 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 HDAC3O15379 428 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CAPN1P07384 714 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 PABPC1P11940 636 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CKMT2P17540 419 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 SERPINA4P29622 427 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 HNF1BP35680 557 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 GRIA2P42262 883 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CLCN5P51795 746 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 KPNA2P52292 529 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 PLOD1Q02809 727 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 MADCAM1Q13477 382 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 PTGR1Q14914 329 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CRY1Q16526 586 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 INSCQ1MX18 579 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 NCEH1Q6PIU2 408 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 KIAA0408Q6ZU52 694 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CHST15Q7LFX5 561 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 UBE2Q1Q7Z7E8 422 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CFAP206Q8IYR0 622 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 FIBINQ8TAL6 211 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 TBC1D14Q9P2M4 693 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 LHX3Q9UBR4 397 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 PRSS21Q9Y6M0 314 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 H0Y858 1186 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 BIRC5O15392 142 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 GREM1O60565 184 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 LEFTY1O75610 366 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 TIPRLO75663 272 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 IPO13O94829 963 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 PAPSS2O95340 614 aaPredicted RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 HTR6P50406 440 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 ST13P50502 369 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 MTPNP58546 118 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 AP1S1P61966 158 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 NADK2Q4G0N4 442 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 LIPMQ5VYY2 423 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CPXM2Q8N436 756 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 FAM110BQ8TC76 370 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 HSPBAP1Q96EW2 488 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 POM121Q96HA1 1249 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 ABHD8Q96I13 439 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 RANBP9Q96S59 729 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 RPP25Q9BUL9 199 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 SPHK2Q9NRA0 654 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 CTPS2Q9NRF8 586 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 DUS2Q9NX74 493 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 SPASTQ9UBP0 616 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 STOML2Q9UJZ1 356 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 INTS6Q9UL03 887 aaKnown RBP9.66□□□□□ -0.86
CTCFL-222ENST00000609232 SLC8A2Q9UPR5 921 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 SCN3AQ9NY46 2000 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 COL4A6Q14031 1691 aa9.66□□□□□ -0.86
CTCFL-222ENST00000609232 TDRD6O60522 2096 aaKnown RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 CDK14O94921 469 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 CD160O95971 181 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 HIST1H2AGP0C0S8 130 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 CR2P20023 1033 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 HIST1H2ADP20671 130 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 DDX6P26196 483 aaKnown RBP eCLIP9.65□□□□□ -0.864e-9■□□□□ 8.1
CTCFL-222ENST00000609232 PSMD8P48556 350 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 TRPC1P48995 793 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 YBX1P67809 324 aaKnown RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 TAF1AQ15573 450 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 ATP13A5Q4VNC0 1218 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 MTX3Q5HYI7 312 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 NCCRP1Q6ZVX7 275 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 MAVSQ7Z434 540 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 ZNF761Q86XN6 746 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 SPPL2CQ8IUH8 684 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 CYGBQ8WWM9 190 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 ARSGQ96EG1 525 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 VPS50Q96JG6 964 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 HIST1H2AHQ96KK5 128 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 CIB1Q99828 191 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 HIST1H2AJQ99878 128 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 H2AFJQ9BTM1 129 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 CCDC90BQ9GZT6 254 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 CDH19Q9H159 772 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 SYNDIG1Q9H7V2 258 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 WDR41Q9HAD4 459 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 EXD2Q9NVH0 621 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 SIRPGQ9P1W8 387 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 MSRAQ9UJ68 235 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 ANKRD6Q9Y2G4 727 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 GNG14A0A1W2PPG7 69 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 MROH6A6NGR9 719 aa9.65□□□□□ -0.86
CTCFL-222ENST00000609232 NPIPB15A6NHN6 443 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 PSMD12O00232 456 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-222ENST00000609232 GSTA4O15217 222 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms