RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NIPAL2Q9H841 368 aa12.37□□□□□ -0.43
CTCFL-218ENST00000608440 ACAD9Q9H845 621 aa12.37□□□□□ -0.43
CTCFL-218ENST00000608440 UTS2RQ9UKP6 389 aa12.37□□□□□ -0.43
CTCFL-218ENST00000608440 PCDHA9Q9Y5H5 950 aa12.37□□□□□ -0.43
CTCFL-218ENST00000608440 PTGDR2Q9Y5Y4 395 aa12.37□□□□□ -0.43
CTCFL-218ENST00000608440 U3KQ87 197 aa12.37□□□□□ -0.43
CTCFL-218ENST00000608440 MYO18AQ92614 2054 aaKnown RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 BCLAF3A2AJT9 711 aaKnown RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 OR2A25A4D2G3 310 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 HACD1B0YJ81 288 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 LINC00587B1AMM8 73 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 HNRNPDLO14979 420 aaKnown RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 YKT6O15498 198 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 ZNF623O75123 536 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 TNFSF8P32971 234 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 CTSKP43235 329 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 SOX10P56693 466 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 OLR1P78380 273 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 USP10Q14694 798 aaKnown RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 DENND1BQ6P3S1 775 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 LIX1LQ8IVB5 337 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 RIMKLAQ8IXN7 391 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 GPD1LQ8N335 351 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 ZNF366Q8N895 744 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 CLEC4DQ8WXI8 215 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 TFAP2BQ92481 460 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 C3orf30Q96M34 536 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 DCLRE1CQ96SD1 692 aaKnown RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 ZNF416Q9BWM5 594 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 SPNS1Q9H2V7 528 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 RNF121Q9H920 327 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 RASSF1Q9NS23 344 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 BFARQ9NZS9 450 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 SLAMF8Q9P0V8 285 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 FNIP2Q9P278 1114 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 SBF1O95248 1867 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 CST1P01037 141 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 GLAP06280 429 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 APOA4P06727 396 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 ARP10275 920 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 RAP1GAPP47736 663 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 OR4D2P58180 307 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 HYAL2Q12891 473 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 ZACNQ401N2 412 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 LRFN4Q6PJG9 635 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 KDELC1Q6UW63 502 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 ARHGAP36Q6ZRI8 547 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 GPAT4Q86UL3 456 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 RASAL3Q86YV0 1011 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 P3H2Q8IVL5 708 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 CAMKK1Q8N5S9 505 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 FAM86B1Q8N7N1 296 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 TXNDC5Q8NBS9 432 aaKnown RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 NLGN4YQ8NFZ3 816 aaPredicted RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 CLHC1Q8NHS4 586 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 STYXQ8WUJ0 223 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 SGTBQ96EQ0 304 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 VPS39Q96JC1 886 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
CTCFL-218ENST00000608440 DUSP21Q9H596 190 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
CTCFL-218ENST00000608440 DICER1Q9UPY3 1922 aaKnown RBP12.35□□□□□ -0.43
CTCFL-218ENST00000608440 GRAP2O75791 330 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-218ENST00000608440 GNPDA1P46926 289 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PTPRRQ15256 657 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 TATDN3Q17R31 274 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 ALFQ53S48 1182 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 HEATR6Q6AI08 1181 aaKnown RBP12.35□□□□□ -0.43
CTCFL-218ENST00000608440 CUZD1Q86UP6 607 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 FBXO30Q8TB52 745 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 ASB15Q8WXK1 588 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 GFM1Q96RP9 751 aaKnown RBP12.35□□□□□ -0.43
CTCFL-218ENST00000608440 TTLL2Q9BWV7 592 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 C1QTNF1Q9BXJ1 281 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 SLC22A4Q9H015 551 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PCDHB16Q9NRJ7 776 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 ING3Q9NXR8 418 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 CYTH4Q9UIA0 394 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PCDHGA9Q9Y5G4 932 aaKnown RBP12.35□□□□□ -0.43
CTCFL-218ENST00000608440 STON1Q9Y6Q2 735 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 TRAV19A0A0A6YYK7 116 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PIPSLA2A3N6 862 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 F8W810 466 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PPP6CO00743 305 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 ADAM11O75078 769 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PMPCBO75439 489 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 PCSK2P16519 638 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 CDH13P55290 713 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 GRIK2Q13002 908 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 LAPTM4AQ15012 233 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
CTCFL-218ENST00000608440 SMYD5Q6GMV2 418 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms