RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ACTR5	Q9H9F9	607 aa	Predicted RBP	20.4	■□□□□ 0.86
NECAB3-222	ENST00000607805	FANCE	Q9HB96	536 aa		20.4	■□□□□ 0.86
NECAB3-222	ENST00000607805	FAM8A1	Q9UBU6	413 aa		20.4	■□□□□ 0.86
NECAB3-222	ENST00000607805	C5orf60	A6NFR6	353 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	C2orf81	A6NN90	581 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805		H3BMH7	237 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	BTN3A1	O00481	513 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	ZNF185	O15231	689 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	SPOP	O43791	374 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	PRKAA1	Q13131	559 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	MRPL49	Q13405	166 aa	Known RBP	20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	NCF4	Q15080	339 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	EIF2S3L	Q2VIR3	472 aa	Known RBP	20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	KATNAL2	Q8IYT4	538 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	CCDC42	Q96M95	316 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	TRAPPC9	Q96Q05	1148 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	DPH2	Q9BQC3	489 aa	Predicted RBP	20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	FICD	Q9BVA6	458 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	FSD1L	Q9BXM9	530 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	MFRP	Q9BY79	579 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	TFB2M	Q9H5Q4	396 aa	Known RBP	20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	ZNHIT6	Q9NWK9	470 aa	Known RBP	20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	GPR83	Q9NYM4	423 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	LUZP4	Q9P127	313 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	RSPH14	Q9UHP6	348 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	ALG6	Q9Y672	507 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	APC	P25054	2843 aa		20.39	■□□□□ 0.85
NECAB3-222	ENST00000607805	IGLV3-16	A0A075B6K0	115 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	KLF7	O75840	302 aa	Predicted RBP	20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	DDAH2	O95865	285 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	PREP	P48147	710 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	ZNF140	P52738	457 aa	Predicted RBP	20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	GEM	P55040	296 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	OLIG2	Q13516	323 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	ATP1A4	Q13733	1029 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	GSE1	Q14687	1217 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	PTCHD3	Q3KNS1	767 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	NXPE1	Q8N323	547 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	LCN9	Q8WX39	176 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	HAUS1	Q96CS2	278 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	SRMS	Q9H3Y6	488 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	GOLPH3	Q9H4A6	298 aa		20.38	■□□□□ 0.85
NECAB3-222	ENST00000607805	MFAP3L	O75121	409 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	ANXA9	O76027	345 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	ZRANB2	O95218	330 aa	Known RBP eCLIP	20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	TPM3	P06753	285 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	VARS	P26640	1264 aa	Known RBP	20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	RBL1	P28749	1068 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	CD151	P48509	253 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	MARCKSL1	P49006	195 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	LMAN1	P49257	510 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	RRAD	P55042	308 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	DENND5A	Q6IQ26	1287 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	BBS12	Q6ZW61	710 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	VSTM4	Q8IW00	320 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	RCOR2	Q8IZ40	523 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	ADGRF3	Q8IZF5	1079 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	OR13C4	Q8NGS5	318 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	C19orf60	Q96EN9	201 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	C10orf88	Q9H8K7	445 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	COG4	Q9H9E3	785 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	SLAMF7	Q9NQ25	335 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	C5AR2	Q9P296	337 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	SERTAD3	Q9UJW9	196 aa		20.37	■□□□□ 0.85
NECAB3-222	ENST00000607805	TRBV5-4	A0A0C4DH59	114 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	GSAP	A4D1B5	854 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805		A6NL46	340 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	APOC4-APOC2	K7ER74	178 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	ZNF749	O43361	778 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	APOC2	P02655	101 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	ATP1B2	P14415	290 aa	Predicted RBP	20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	CYP2A7	P20853	494 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	PDHA2	P29803	388 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	CDHR3	Q6ZTQ4	885 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	SNX20	Q7Z614	316 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	OR52E1	Q8NGJ3	308 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	ULK4	Q96C45	1275 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	FERD3L	Q96RJ6	166 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	APOL2	Q9BQE5	337 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	DHRS4	Q9BTZ2	278 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	SLC29A3	Q9BZD2	475 aa		20.36	■□□□□ 0.85
NECAB3-222	ENST00000607805	CCDC66	A2RUB6	948 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	RALB	P11234	206 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	PVR	P15151	417 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	HADHA	P40939	763 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	GABRA4	P48169	554 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	BOP1	Q14137	746 aa	Known RBP	20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	KRT33B	Q14525	404 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	PLEKHN1	Q494U1	663 aa	Predicted RBP	20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	CRB2	Q5IJ48	1285 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	IGFL3	Q6UXB1	125 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	KLHDC8B	Q8IXV7	354 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	HEXDC	Q8WVB3	486 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	SNRNP40	Q96DI7	357 aa	Known RBP	20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	DCUN1D1	Q96GG9	259 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	TCTN2	Q96GX1	697 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	COPS8	Q99627	209 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	CHRNA10	Q9GZZ6	450 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	MVB12B	Q9H7P6	319 aa		20.35	■□□□□ 0.85
NECAB3-222	ENST00000607805	ARNT2	Q9HBZ2	717 aa		20.35	■□□□□ 0.85

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms