RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KLF2Q9Y5W3 355 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 NAV1Q8NEY1 1877 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 ITGB4P16144 1822 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARID2Q68CP9 1835 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 GREB1LQ9C091 1923 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SIPA1L1O43166 1804 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 A0A0G2JMP0 313 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC195A0A1B0GUA6 201 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 A0A1W2PQ72 361 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 A0A1W2PQH9 124 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TCRBV5S2A0A599 114 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CCDC78A2IDD5 438 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRR23AA6NEV1 266 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TARM1B6A8C7 271 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 F8VP50 259 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 STX16-NPEPL1H3BU86 382 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 UBXN8O00124 270 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SDHDO14521 159 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CTDSP2O14595 271 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TOR1AO14656 332 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 MSH4O15457 936 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 YKT6O15498 198 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PI15O43692 258 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TBC1D4O60343 1298 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 NOS1APO75052 506 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 MAFO75444 373 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TIPRLO75663 272 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PSMD10O75832 226 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SOAT2O75908 522 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRKD3O94806 890 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 DDHD2O94830 711 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 MFN2O95140 757 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CSPG5O95196 566 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 WDPCPO95876 746 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 LDLRP01130 860 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 NPPAP01160 153 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 C4BPAP04003 597 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ALPPP05187 535 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 S100A6P06703 90 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 KRT19P08727 400 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 HTR1AP08908 422 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CYP19A1P11511 503 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 IL7P13232 177 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 GLULP15104 373 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF28P17035 718 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRKACAP17612 351 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TGM2P21980 687 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PSMA4P25789 261 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TYK2P29597 1187 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SPRP35270 261 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 MSX2P35548 267 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 GJC1P36383 396 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ETFBP38117 255 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 GZMKP49863 264 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ALDH3A2P51648 485 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 LIMK1P53667 647 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CDH13P55290 713 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 EEFSECP57772 596 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ISL1P61371 349 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PSMC5P62195 406 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 RACK1P63244 317 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ROR1Q01973 937 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRKCEQ02156 737 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC25A11Q02978 314 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PEX6Q13608 980 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 DAG1Q14118 895 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 AAK1Q2M2I8 961 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 RFX4Q33E94 735 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF404Q494X3 552 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 BRDTQ58F21 947 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ODR4Q5SWX8 454 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 LIPMQ5VYY2 423 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SULT1C3Q6IMI6 304 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZYG11AQ6WRX3 759 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PAGE2Q7Z2X7 111 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 R3HCC1LQ7Z5L2 792 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 ADCK1Q86TW2 530 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PROSER1Q86XN7 944 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 RAB43Q86YS6 212 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 GPALPP1Q8IXQ4 340 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 PM20D2Q8IYS1 436 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 LINC00518Q8N0U6 118 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 DAW1Q8N136 415 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TCAIMQ8N3R3 496 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 CHDHQ8NE62 594 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 OR52E4Q8NGH9 312 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 OR10T2Q8NGX3 314 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 BPIFB1Q8TDL5 484 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAR1Q8WVX9 515 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 DNAJA4Q8WW22 397 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 KLHL6Q8WZ60 621 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SMG7Q92540 1137 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 DIO2Q92813 273 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 USP13Q92995 863 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 HDAC10Q969S8 669 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 SH3KBP1Q96B97 665 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TBC1D20Q96BZ9 403 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 DCPSQ96C86 337 aaKnown RBP4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 FAF2Q96CS3 445 aa4.01□□□□□ -1.77
HMGB1P50-201ENST00000605814 TMCO6Q96DC7 493 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms