RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FER1L6Q2WGJ9 1857 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 TRBV23-1A0A0A0MS06 115 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 METTL15A6NJ78 407 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 A8MXK9 166 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 E7ENX8 843 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 TSPAN6O43657 245 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ENTPD3O75355 529 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 TADA2AO75478 443 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 GALTP07902 379 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 H2AFZP0C0S5 128 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 SBK2P0C263 348 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 XRCC1P18887 633 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ADSSP30520 456 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 SPRP35270 261 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 BCAR1P56945 870 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 CLDN10P78369 228 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 MPP1Q00013 466 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 CYP24A1Q07973 514 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF177Q13360 481 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ILKQ13418 452 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 MTMR2Q13614 643 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 CALCRLQ16602 461 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 KRTCAP3Q53RY4 240 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 EFHC2Q5JST6 749 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 RAET1GQ6H3X3 334 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ZBTB49Q6ZSB9 765 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 H2AFVQ71UI9 128 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 REC114Q7Z4M0 266 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 POLNQ7Z5Q5 900 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ENTHD1Q8IYW4 607 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 OR8H3Q8N146 312 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 WDSUB1Q8N9V3 476 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 AGBL3Q8NEM8 1001 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 OR13C3Q8NGS6 347 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ST7LQ8TDW4 575 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 LINC00052Q96N35 136 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 OCSTAMPQ9BR26 566 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 REG4Q9BYZ8 158 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 FAM83DQ9H4H8 585 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 NDUFAF4Q9P032 175 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 MARK1Q9P0L2 795 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 UBQLN2Q9UHD9 624 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ADAM30Q9UKF2 790 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ATXN7L1Q9ULK2 861 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 PCDHGA7Q9Y5G6 932 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ADGRA2Q96PE1 1338 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 PXDNQ92626 1479 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 NCF1BA6NI72 391 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RHPN2P1A8MT19 583 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 NCF1CA8MVU1 366 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 H0YAE9 185 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ACOT8O14734 319 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 TGM5O43548 720 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 SORBS2O94875 1100 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CNOT4O95628 575 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RAF1P04049 648 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 PGRP06401 933 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 OR4E1P0C645 316 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 IVDP26440 423 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 HTR1BP28222 390 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 SLC7A1P30825 629 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 PPM1AP35813 382 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 GDF10P55107 478 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ASIC1P78348 528 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ARID5AQ03989 594 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CACNB2Q08289 660 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DDX39BQ13838 428 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CCDC142Q17RM4 750 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 LIPJQ5W064 366 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 LMBR1LQ6UX01 489 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 TRILQ7L0X0 811 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 BIRC7Q96CA5 298 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 PFDN5Q99471 154 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 SOX7Q9BT81 388 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RNF32Q9H0A6 362 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DUSP15Q9H1R2 295 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 KAT8Q9H7Z6 458 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF334Q9HCZ1 680 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 GJB4Q9NTQ9 266 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 NAGPAQ9UK23 515 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 HSPB11Q9Y547 144 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 FRMPD2Q68DX3 1309 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DENND3A2RUS2 1198 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 KPNA3O00505 521 aaPredicted RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DLGAP1O14490 977 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DCLK1O15075 740 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 SELENOFO60613 162 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 MED26O95402 600 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 DNTTP04053 509 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CKMT1AP12532 417 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 NDUFB7P17568 137 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 CHRNB2P17787 502 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ME2P23368 584 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 ATP5A1P25705 553 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 RFC3P40938 356 aa8.73□□□□□ -1.01
COMMD3-215ENST00000602574 NSFP46459 744 aaKnown RBP8.73□□□□□ -1.01
COMMD3-215ENST00000602574 STAT5BP51692 787 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms