RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 TOX3O15405 576 aaPredicted RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 RRP8O43159 456 aaKnown RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 RAD51CO43502 376 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 GPC4O75487 556 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 BANF1O75531 89 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 URI1O94763 535 aaPredicted RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 ESR1P03372 595 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 ANKRD34CP0C6C1 535 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 FGF3P11487 239 aaPredicted RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 AOAHP28039 575 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 ACADLP28330 430 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 FMO4P31512 558 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 RPL21P46778 160 aaKnown RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 LEPRP48357 1165 aaKnown RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 CSE1LP55060 971 aaKnown RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 ARL4CP56559 192 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 MRPS25P82663 173 aaKnown RBP16.41■□□□□ 0.22
TRIM28-215ENST00000601150 HSPA14Q0VDF9 509 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 CRYMQ14894 314 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 SPANXN3Q5MJ09 141 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 IRGCQ6NXR0 463 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 OOSP2Q86WS3 158 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 SLC22A15Q8IZD6 547 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 ZNF248Q8NDW4 579 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 LRRC39Q96DD0 335 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 BIRC8Q96P09 236 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 DCBLD2Q96PD2 775 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 ERP44Q9BS26 406 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 B3GNT4Q9C0J1 378 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 CDC23Q9UJX2 597 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 CDYLQ9Y232 598 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 ASF1AQ9Y294 204 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 CRYL1Q9Y2S2 319 aa16.41■□□□□ 0.22
TRIM28-215ENST00000601150 DMXL2Q8TDJ6 3036 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 URB1O60287 2271 aaKnown RBP16.4■□□□□ 0.22
TRIM28-215ENST00000601150 A0A087WV48 116 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 OR6C74A6NCV1 312 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 OR5K3A6NET4 321 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 EFCAB7A8K855 629 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 B4E171 279 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 RASSF9O75901 435 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 S1PR4O95977 384 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 TUBB4AP04350 444 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 SLC5A2P31639 672 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 TSPAN7P41732 249 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 CTBP1Q13363 440 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 CTSL3PQ5NE16 218 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 TMEM164Q5U3C3 297 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 ARMC6Q6NXE6 501 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 LRRC69Q6ZNQ3 347 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 FAM92BQ6ZTR7 304 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 OTOAQ7RTW8 1153 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 PRSS42Q7Z5A4 293 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 FAM129CQ86XR2 697 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 DENND6AQ8IWF6 608 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 TBC1D21Q8IYX1 336 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 OR4E2Q8NGC2 313 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 GABPB2Q8TAK5 448 aaPredicted RBP16.4■□□□□ 0.22
TRIM28-215ENST00000601150 GSDMBQ8TAX9 411 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 LCN9Q8WX39 176 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 ZNF592Q92610 1267 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 USP7Q93009 1102 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 PWWP2AQ96N64 755 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 TAAR9Q96RI9 348 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 CD180Q99467 661 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 HGH1Q9BTY7 390 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 TRIT1Q9H3H1 467 aaKnown RBP16.4■□□□□ 0.22
TRIM28-215ENST00000601150 SRMSQ9H3Y6 488 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 TFB2MQ9H5Q4 396 aaKnown RBP16.4■□□□□ 0.22
TRIM28-215ENST00000601150 HRASLS2Q9NWW9 162 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 OCIAD1Q9NX40 245 aa16.4■□□□□ 0.22
TRIM28-215ENST00000601150 KIF2AO00139 706 aaPredicted RBP16.39■□□□□ 0.21
TRIM28-215ENST00000601150 TP73O15350 636 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 SLCO2B1O94956 709 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 PKMP14618 531 aaKnown RBP16.39■□□□□ 0.21
TRIM28-215ENST00000601150 ELK3P41970 407 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 SLC1A2P43004 574 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 CALCOCO2Q13137 446 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 PRKG2Q13237 762 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 HSP90AA5PQ58FG0 334 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 PLEKHS1Q5SXH7 462 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 CACHD1Q5VU97 1274 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 KCNMB4Q86W47 210 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 VRK3Q8IV63 474 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 IGDCC3Q8IVU1 814 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 BMPERQ8N8U9 685 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 OR52E1Q8NGJ3 308 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 OR5AR1Q8NGP9 310 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 OR5K2Q8NHB8 316 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 ART4Q93070 314 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 DPH5Q9H2P9 285 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 ZNF768Q9H5H4 540 aaKnown RBP16.39■□□□□ 0.21
TRIM28-215ENST00000601150 FBXO6Q9NRD1 293 aaPredicted RBP16.39■□□□□ 0.21
TRIM28-215ENST00000601150 SLC39A1Q9NY26 324 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 WHRNQ9P202 907 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 POLG2Q9UHN1 485 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 FBXO5Q9UKT4 447 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 CHMP2BQ9UQN3 213 aa16.39■□□□□ 0.21
TRIM28-215ENST00000601150 WDFY3Q8IZQ1 3526 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms