RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PCGF5Q86SE9 256 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 DENND6AQ8IWF6 608 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 SPACA3Q8IXA5 215 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 SLC22A15Q8IZD6 547 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 ZNF248Q8NDW4 579 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 OR52E1Q8NGJ3 308 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 OR5AR1Q8NGP9 310 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 C16orf45Q96MC5 204 aaPredicted RBP15.33■□□□□ 0.04
RPS28-203ENST00000600659 B3GNT4Q9C0J1 378 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 ZMYND15Q9H091 742 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 ZNF768Q9H5H4 540 aaKnown RBP15.33■□□□□ 0.04
RPS28-203ENST00000600659 HEBP2Q9Y5Z4 205 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 CHD6Q8TD26 2715 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 EFCAB7A8K855 629 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 TOX3O15405 576 aaPredicted RBP15.32■□□□□ 0.04
RPS28-203ENST00000600659 SLCO2B1O94956 709 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 PAMP19021 973 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 NDUFS1P28331 727 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 CSTF2P33240 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
RPS28-203ENST00000600659 PPARGP37231 505 aaPredicted RBP15.32■□□□□ 0.04
RPS28-203ENST00000600659 SLC1A2P43004 574 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 EIF3BP55884 814 aaKnown RBP15.32■□□□□ 0.04
RPS28-203ENST00000600659 TLE3Q04726 772 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 CBLBQ13191 982 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 CLN3Q13286 438 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 PLCL1Q15111 1095 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 ZNF470Q6ECI4 717 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 FAM92BQ6ZTR7 304 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 LRRC6Q86X45 466 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 ACVR1CQ8NER5 493 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 KLHL6Q8WZ60 621 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 ART4Q93070 314 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 NAF1Q96HR8 494 aaKnown RBP15.32■□□□□ 0.04
RPS28-203ENST00000600659 PPM1MQ96MI6 270 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 TCF12Q99081 682 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 EBNA1BP2Q99848 306 aaKnown RBP15.32■□□□□ 0.04
RPS28-203ENST00000600659 HGH1Q9BTY7 390 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 MENTQ9BUN1 341 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 TRIM31Q9BZY9 425 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 SPRY4Q9C004 299 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 TFB2MQ9H5Q4 396 aaKnown RBP15.32■□□□□ 0.04
RPS28-203ENST00000600659 MVB12BQ9H7P6 319 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 APMAPQ9HDC9 416 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 GALPQ9UBC7 116 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 GNPTGQ9UJJ9 305 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 B3GALT1Q9Y5Z6 326 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 FAM169AQ9Y6X4 670 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 COLEC10Q9Y6Z7 277 aa15.32■□□□□ 0.04
RPS28-203ENST00000600659 IGHV5-51A0A0C4DH38 117 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 UBA6A0AVT1 1052 aaPredicted RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 IFRD1O00458 451 aaPredicted RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 BTN3A3O00478 584 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 NIPSNAP2O75323 286 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 NDUFS3O75489 264 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 PGAM1P18669 254 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 KPNA2P52292 529 aaKnown RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 CSE1LP55060 971 aaKnown RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 MC2RQ01718 297 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 HSPA14Q0VDF9 509 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 CTBP1Q13363 440 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 GRB7Q14451 532 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 LONRF1Q17RB8 773 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 COL28A1Q2UY09 1125 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 SYTL3Q4VX76 610 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 RNF187Q5TA31 235 aaPredicted RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 IRGCQ6NXR0 463 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 ZNF549Q6P9A3 640 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 DTX1Q86Y01 620 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 OR5K2Q8NHB8 316 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 HNRNPLLQ8WVV9 542 aaKnown RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 SNF8Q96H20 258 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 SLC41A2Q96JW4 573 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 TAAR9Q96RI9 348 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 FERD3LQ96RJ6 166 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 MAP3K3Q99759 626 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 INTS10Q9NVR2 710 aaKnown RBP15.31■□□□□ 0.04
RPS28-203ENST00000600659 ICKQ9UPZ9 632 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 CRYL1Q9Y2S2 319 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 TEX264Q9Y6I9 313 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 MGAQ8IWI9 3026 aa15.31■□□□□ 0.04
RPS28-203ENST00000600659 FAM208BQ5VWN6 2430 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 OR6C74A6NCV1 312 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 EFCAB8A8MWE9 144 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 E7ESA3 106 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 BTN3A1O00481 513 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 ESR1P03372 595 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 FMO4P31512 558 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 PPM1FP49593 454 aaPredicted RBP15.3■□□□□ 0.04
RPS28-203ENST00000600659 SEPHS1P49903 392 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 SH3BP2P78314 561 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 MPP1Q00013 466 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 PLOD1Q02809 727 aaPredicted RBP15.3■□□□□ 0.04
RPS28-203ENST00000600659 PRKG2Q13237 762 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 BBS9Q3SYG4 887 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 STEAP4Q687X5 459 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 ANKS6Q68DC2 871 aa15.3■□□□□ 0.04
RPS28-203ENST00000600659 PTRHD1Q6GMV3 140 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms