RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	CEACAM20	Q6UY09	585 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	NAPRT	Q6XQN6	538 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	FAM92B	Q6ZTR7	304 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	OOSP2	Q86WS3	158 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	OR4E2	Q8NGC2	313 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SNRNP27	Q8WVK2	155 aa	Known RBP	13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ASZ1	Q8WWH4	475 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LCN9	Q8WX39	176 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	UBXN4	Q92575	508 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SIGLEC10	Q96LC7	697 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	FCRL3	Q96P31	734 aa	Predicted RBP	13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CCNL2	Q96S94	520 aa	Predicted RBP	13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TSSK1B	Q9BXA7	367 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SAMD15	Q9P1V8	674 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PCDHB11	Q9Y5F2	797 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ADAMTS20	P59510	1910 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IGHV5-51	A0A0C4DH38	117 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	STMND1	H3BQB6	276 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DNALI1	O14645	258 aa	Predicted RBP	13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	POLR1C	O15160	346 aa	Predicted RBP	13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	EFS	O43281	561 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PAM	P19021	973 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SEPHS1	P49903	392 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IL11RA	Q14626	422 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TYSND1	Q2T9J0	566 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SYTL3	Q4VX76	610 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PTRHD1	Q6GMV3	140 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	NEPRO	Q6NW34	567 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	GPR155	Q7Z3F1	870 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PCGF5	Q86SE9	256 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KMT5C	Q86Y97	462 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TBC1D21	Q8IYX1	336 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SLC22A15	Q8IZD6	547 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CARF	Q8N187	725 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	AGGF1	Q8N302	714 aa	eCLIP	13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	OR52E1	Q8NGJ3	308 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	NKD1	Q969G9	470 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SLC41A2	Q96JW4	573 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RUNDC3B	Q96NL0	473 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	BIRC8	Q96P09	236 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	MAP3K3	Q99759	626 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CTRC	Q99895	268 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TRIM56	Q9BRZ2	755 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SRMS	Q9H3Y6	488 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CPNE5	Q9HCH3	593 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	APMAP	Q9HDC9	416 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ASIC3	Q9UHC3	531 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RALY	Q9UKM9	306 aa	Known RBP	13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CDYL	Q9Y232	598 aa		13.1	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ZCWPW2	A0A1B0GU75	182 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TLCD2	A6NGC4	264 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IQCF5	A8MTL0	148 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	GOLGA8K	D6RF30	607 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	GOLGA8T	H3BQL2	631 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CCDC188	H7C350	402 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	MATN2	O00339	956 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PFDN6	O15212	129 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SLCO2B1	O94956	709 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	APOA4	P06727	396 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ITGB6	P18564	788 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	AOAH	P28039	575 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PAFAH1B1	P43034	410 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ADAR	P55265	1226 aa	Known RBP	13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CXADR	P78310	365 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SH3BP2	P78314	561 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DR1	Q01658	176 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	VAC14	Q08AM6	782 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	HSPA14	Q0VDF9	509 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PRKG2	Q13237	762 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DHX34	Q14147	1143 aa	Known RBP	13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RNF187	Q5TA31	235 aa	Predicted RBP	13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ARMC6	Q6NXE6	501 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CCDC81	Q6ZN84	652 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	HOOK3	Q86VS8	718 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	AMIGO1	Q86WK6	493 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KLHL7	Q8IXQ5	586 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KRT222	Q8N1A0	295 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	OR5AR1	Q8NGP9	310 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	OR5K2	Q8NHB8	316 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LKAAEAR1	Q8TD35	194 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LPGAT1	Q92604	370 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PANX3	Q96QZ0	392 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TRIT1	Q9H3H1	467 aa	Known RBP	13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	POLG2	Q9UHN1	485 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	GNPTG	Q9UJJ9	305 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PILRA	Q9UKJ1	303 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ASF1A	Q9Y294	204 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RPS6KL1	Q9Y6S9	549 aa		13.09	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	UBA6	A0AVT1	1052 aa	Predicted RBP	13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517		K7ENP7	123 aa		13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	BTN3A3	O00478	584 aa		13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	KPNA5	O15131	536 aa		13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	USP1	O94782	785 aa		13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	S1PR4	O95977	384 aa		13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	TPBGL	P0DKB5	382 aa		13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	FGF5	P12034	268 aa		13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	POLR2C	P19387	275 aa	Predicted RBP	13.08	□□□□□ -0.32
ARHGEF1-222	ENST00000600517	OGN	P20774	298 aa	Known RBP	13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms