RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 F8W8V4 182 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 ARHGAP6O43182 974 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 CPNE3O75131 537 aaKnown RBP15.36■□□□□ 0.05
VRK3-221ENST00000600284 CREG1O75629 220 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 WISP1O95388 367 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 IFNB1P01574 187 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 FTH1P02794 183 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 MSL3P1P0C860 447 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 PRSS56P0CW18 603 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 ADRA1DP25100 572 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 PDHA2P29803 388 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 DNASE1L3Q13609 305 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 BOP1Q14137 746 aaKnown RBP15.36■□□□□ 0.05
VRK3-221ENST00000600284 MEI1Q5TIA1 1274 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 CERS6Q6ZMG9 384 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 ZNF662Q6ZS27 426 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 NLRP9Q7RTR0 991 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 TFGQ92734 400 aaPredicted RBP15.36■□□□□ 0.05
VRK3-221ENST00000600284 SGSM3Q96HU1 749 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 LRFN5Q96NI6 719 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 FANCEQ9HB96 536 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 PIH1D1Q9NWS0 290 aaKnown RBP15.36■□□□□ 0.05
VRK3-221ENST00000600284 POLHQ9Y253 713 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 KCNMB2Q9Y691 235 aa15.36■□□□□ 0.05
VRK3-221ENST00000600284 E7EVH7 732 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 MAP3K7O43318 606 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 KATNA1O75449 491 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 SCRG1O75711 98 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 OR56A5P0C7T3 313 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 CDH3P22223 829 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 PRDX3P30048 256 aaKnown RBP15.35■□□□□ 0.05
VRK3-221ENST00000600284 FOXN2P32314 431 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 LMAN1P49257 510 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 CSRP3P50461 194 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 KCNC4Q03721 635 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 SEMA5AQ13591 1074 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 ERV3-1Q14264 604 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 RPS6KA1Q15418 735 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 TSTD2Q5T7W7 516 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 PPP1R21Q6ZMI0 780 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 ZNF517Q6ZMY9 492 aaPredicted RBP15.35■□□□□ 0.05
VRK3-221ENST00000600284 AMIGO1Q86WK6 493 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 TAB3Q8N5C8 712 aaPredicted RBP15.35■□□□□ 0.05
VRK3-221ENST00000600284 PHC3Q8NDX5 983 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 OR52E1Q8NGJ3 308 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 OR13J1Q8NGT2 312 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 C9orf43Q8TAL5 461 aaPredicted RBP15.35■□□□□ 0.05
VRK3-221ENST00000600284 CT55Q8WUE5 264 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 PITPNM3Q9BZ71 974 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 CLMPQ9H6B4 373 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 SOHLH2Q9NX45 425 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 PAK5Q9P286 719 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 POLG2Q9UHN1 485 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 BOD1L1Q8NFC6 3051 aa15.35■□□□□ 0.05
VRK3-221ENST00000600284 SPTA1P02549 2419 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 TLN1Q9Y490 2541 aaKnown RBP15.34■□□□□ 0.05
VRK3-221ENST00000600284 CCDC162PA2VCL2 907 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 SLC9B1P1A6NJY1 282 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 C2orf74A8MZ97 194 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 BTN3A3O00478 584 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 NTRK1P04629 796 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 PPARGP37231 505 aaPredicted RBP15.34■□□□□ 0.05
VRK3-221ENST00000600284 PREPP48147 710 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 ARCN1P48444 511 aaKnown RBP15.34■□□□□ 0.05
VRK3-221ENST00000600284 RPS15P62841 145 aaKnown RBP15.34■□□□□ 0.05
VRK3-221ENST00000600284 NFKB2Q00653 900 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 ACVR1Q04771 509 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 GPR19Q15760 415 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 CCNG2Q16589 344 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 CCDC38Q502W7 563 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 ATP1A1-AS1Q5TC04 95 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 DRICH1Q6PGQ1 229 aaPredicted RBP15.34■□□□□ 0.05
VRK3-221ENST00000600284 AFTPHQ6ULP2 937 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 C4orf22Q6V702 233 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 TMEM126BQ8IUX1 230 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 TBC1D21Q8IYX1 336 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 CCDC89Q8N998 374 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 C1orf54Q8WWF1 131 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 HDAC10Q969S8 669 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 ABHD17AQ96GS6 310 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 TWSG1Q9GZX9 223 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 CASS4Q9NQ75 786 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 RAB6BQ9NRW1 208 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 ANAPC2Q9UJX6 822 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 DRG1Q9Y295 367 aaKnown RBP15.34■□□□□ 0.05
VRK3-221ENST00000600284 ZKSCAN5Q9Y2L8 839 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 PRSS21Q9Y6M0 314 aa15.34■□□□□ 0.05
VRK3-221ENST00000600284 SLC5A10A0PJK1 596 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 PIPSLA2A3N6 862 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 GSAPA4D1B5 854 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 OR51F1A6NGY5 319 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 BTN3A1O00481 513 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 ZIC2O95409 532 aaPredicted RBP15.33■□□□□ 0.04
VRK3-221ENST00000600284 GOT2P00505 430 aaKnown RBP15.33■□□□□ 0.04
VRK3-221ENST00000600284 KLK3P07288 261 aaPredicted RBP15.33■□□□□ 0.04
VRK3-221ENST00000600284 ACADLP28330 430 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 PTPN4P29074 926 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 ADGRF3Q8IZF5 1079 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 OR4L1Q8NH43 312 aa15.33■□□□□ 0.04
VRK3-221ENST00000600284 MAIP1Q8WWC4 291 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms