RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SLC2A4P14672 509 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 XRCC1P18887 633 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 GMPRP36959 345 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC19A1P41440 591 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 HALP42357 657 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 RGS4P49798 205 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 LIMK1P53667 647 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 PROX2Q3B8N5 592 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 KRT71Q3SY84 523 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 TNFAIP8L3Q5GJ75 292 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 PPM1JQ5JR12 505 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 CEP85LQ5SZL2 805 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ZCCHC8Q6NZY4 707 aaKnown RBP12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 UNC5DQ6UXZ4 953 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 PIWIL4Q7Z3Z4 852 aaKnown RBP12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 CROCCP2Q86T23 111 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 SLC35F3Q8IY50 421 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 CENPLQ8N0S6 344 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ARL14Q8N4G2 192 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ARL10Q8N8L6 244 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 KYQ8NBH2 561 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ACMSDQ8TDX5 336 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ASB11Q8WXH4 323 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 DERL2Q9GZP9 239 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 IGSF5Q9NSI5 407 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 IKZF3Q9UKT9 509 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 BTBD3Q9Y2F9 522 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 ACOT9Q9Y305 439 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 U3KQA8 63 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 FRYLO94915 3013 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 TMEM131Q92545 1883 aa12.35□□□□□ -0.43
CHMP2A-206ENST00000600118 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 A0A1W2PPM1 405 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 FOXO6A8MYZ6 492 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 GFYI3L273 518 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 SIGLEC6O43699 453 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 GFRA3O60609 400 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 PSIP1O75475 530 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 SASH3O75995 380 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 MPOP05164 745 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 CCDC166P0CW27 439 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 CCNFP41002 786 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 GRK6P43250 576 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 FASLGP48023 281 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 IRF9Q00978 393 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 DLG1Q12959 904 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 ABRQ12979 859 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 INAVAQ3KP66 663 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 C14orf28Q4W4Y0 310 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 TAF1BQ53T94 588 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 STPG1Q5TH74 334 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 DUS1LQ6P1R4 473 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 RAPH1Q70E73 1250 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 CLEC14AQ86T13 490 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 TRABD2AQ86V40 505 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 EID2Q8N6I1 236 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 BAHD1Q8TBE0 780 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 PGM2Q96G03 612 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 C12orf66Q96MD2 445 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 GPR78Q96P69 363 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 MVB12BQ9H7P6 319 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 POT1Q9NUX5 634 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 SIRPGQ9P1W8 387 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 RUVBL2Q9Y230 463 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 CFAP20Q9Y6A4 193 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 GVINP1Q7Z2Y8 2422 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 ADAMTS9Q9P2N4 1935 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 PIKFYVEQ9Y2I7 2098 aa12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 RIF1Q5UIP0 2472 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-206ENST00000600118 TRBV23OR9-2A0A075B6M9 112 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 PRAMEF33A0A0G2JMD5 474 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 SLC16A5O15375 505 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 CBFA2T3O75081 653 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 KLHL2O95198 593 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 C1orf105O95561 183 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 MT-ND3P03897 115 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 LTA4HP09960 611 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 COL6A2P12110 1019 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 CD1DP15813 335 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 KRT15P19012 456 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 MAPK9P45984 424 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 ATP6V0D1P61421 351 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 SLC18A2Q05940 514 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 GRB7Q14451 532 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 PIP4P1Q86T03 277 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 TBC1D1Q86TI0 1168 aaPredicted RBP12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 SLC9B2Q86UD5 537 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 TBC1D21Q8IYX1 336 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 MYO1HQ8N1T3 1032 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 PLD6Q8N2A8 252 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 SPATA6LQ8N4H0 392 aa12.33□□□□□ -0.44
CHMP2A-206ENST00000600118 AVL9Q8NBF6 648 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms