RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ACTRT1Q8TDG2 376 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 TSSK1BQ9BXA7 367 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 ULBP3Q9BZM4 244 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 MARCH4Q9P2E8 410 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-204ENST00000599398 ZNF185O15231 689 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 PHF2O75151 1096 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 TTPAP49638 278 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 IL11RAQ14626 422 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 ANKRD22Q5VYY1 191 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 CASC4Q6P4E1 433 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 CES3Q6UWW8 571 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 OR52E1Q8NGJ3 308 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 SLC39A7Q92504 469 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 MFSD3Q96ES6 412 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 SLC41A2Q96JW4 573 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 KIFC1Q9BW19 673 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 MRM3Q9HC36 420 aaKnown RBP21.98■■□□□ 1.11
CCDC9-204ENST00000599398 ASF1AQ9Y294 204 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 PCDHGA4Q9Y5G9 962 aa21.98■■□□□ 1.11
CCDC9-204ENST00000599398 SMG1Q96Q15 3661 aaKnown RBP21.98■■□□□ 1.11
CCDC9-204ENST00000599398 GSAPA4D1B5 854 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 USP27XA6NNY8 438 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 AVILO75366 819 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 WT1P19544 449 aaPredicted RBP21.97■■□□□ 1.11
CCDC9-204ENST00000599398 MAP4P27816 1152 aaKnown RBP21.97■■□□□ 1.11
CCDC9-204ENST00000599398 MAGEA6P43360 314 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 KPNA2P52292 529 aaKnown RBP21.97■■□□□ 1.11
CCDC9-204ENST00000599398 PLOD1Q02809 727 aaPredicted RBP21.97■■□□□ 1.11
CCDC9-204ENST00000599398 KCNAB1Q14722 419 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 CYB5D1Q6P9G0 228 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 GRK7Q8WTQ7 553 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 CPT1BQ92523 772 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 PDLIM2Q96JY6 352 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 SPRY4Q9C004 299 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 PDE7BQ9NP56 450 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 SEMA5BQ9P283 1151 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 SOX13Q9UN79 622 aa21.97■■□□□ 1.11
CCDC9-204ENST00000599398 TMEM184BQ9Y519 407 aaPredicted RBP21.97■■□□□ 1.11
CCDC9-204ENST00000599398 SLC5A10A0PJK1 596 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 GOLGA8MH3BSY2 632 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 CES2O00748 559 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 PRMT5O14744 637 aaPredicted RBP21.96■■□□□ 1.11
CCDC9-204ENST00000599398 NDUFS3O75489 264 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 VAPBO95292 243 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 EBLN1P0CF75 366 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 LIFP15018 202 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 FOLR1P15328 257 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 CDH3P22223 829 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 FNTAP49354 379 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 TUBB3Q13509 450 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 PTRHD1Q6GMV3 140 aaKnown RBP21.96■■□□□ 1.11
CCDC9-204ENST00000599398 TIPARPQ7Z3E1 657 aaKnown RBP21.96■■□□□ 1.11
CCDC9-204ENST00000599398 PPP1R3BQ86XI6 285 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 KMT5CQ86Y97 462 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 OR5AR1Q8NGP9 310 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 KIAA1143Q96AT1 154 aaPredicted RBP21.96■■□□□ 1.11
CCDC9-204ENST00000599398 NRTNQ99748 197 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 TRIT1Q9H3H1 467 aaKnown RBP21.96■■□□□ 1.11
CCDC9-204ENST00000599398 TFB2MQ9H5Q4 396 aaKnown RBP21.96■■□□□ 1.11
CCDC9-204ENST00000599398 XKR8Q9H6D3 395 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 SOHLH2Q9NX45 425 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 SAMD15Q9P1V8 674 aa21.96■■□□□ 1.11
CCDC9-204ENST00000599398 TDRKHQ9Y2W6 561 aaKnown RBP21.96■■□□□ 1.11
CCDC9-204ENST00000599398 ATRXP46100 2492 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 IQCF5A8MTL0 148 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 MATN2O00339 956 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 BTN3A1O00481 513 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 TMEM63AO94886 807 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 ZBTB11O95625 1053 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-204ENST00000599398 DLGAP3O95886 979 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 ZNF28P17035 718 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 CCR7P32248 378 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 HSD11B2P80365 405 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 HSPA14Q0VDF9 509 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 FBXO38Q6PIJ6 1188 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 AMIGO1Q86WK6 493 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 UNC5BQ8IZJ1 945 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 KRT222Q8N1A0 295 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 MPP5Q8N3R9 675 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 LSM14AQ8ND56 463 aaKnown RBP21.95■■□□□ 1.1
CCDC9-204ENST00000599398 LKAAEAR1Q8TD35 194 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 TTC9Q92623 222 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 PPM1MQ96MI6 270 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 CARD6Q9BX69 1037 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 GPN2Q9H9Y4 310 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-204ENST00000599398 LNPEPQ9UIQ6 1025 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 POMT2Q9UKY4 750 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 RARRES3Q9UL19 164 aa21.95■■□□□ 1.1
CCDC9-204ENST00000599398 BHMG1C9JSJ3 638 aaPredicted RBP21.94■■□□□ 1.1
CCDC9-204ENST00000599398 GOLGA8KD6RF30 607 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 GOLGA8TH3BQL2 631 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 BTN3A3O00478 584 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 KIAA0754O94854 1291 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 PRB1P04280 392 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 FGF5P12034 268 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 TCP1P17987 556 aaKnown RBP21.94■■□□□ 1.1
CCDC9-204ENST00000599398 ACADLP28330 430 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 GNG11P61952 73 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 ACY1Q03154 408 aa21.94■■□□□ 1.1
CCDC9-204ENST00000599398 PPP1R7Q15435 360 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms