RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 MVB12BQ9H7P6 319 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 CHRAC1Q9NRG0 131 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 FGF21Q9NSA1 209 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 LNPEPQ9UIQ6 1025 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 PPP2R2CQ9Y2T4 447 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 SLC9B1P1A6NJY1 282 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 QSOX1O00391 747 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 LIN7AO14910 233 aaPredicted RBP14.65□□□□□ -0.06
LIG1-215ENST00000597901 OR1I1O60431 355 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 ZBTB11O95625 1053 aaPredicted RBP14.65□□□□□ -0.06
LIG1-215ENST00000597901 FTH1P02794 183 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 MT-ND3P03897 115 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 OR56A5P0C7T3 313 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 PRDX3P30048 256 aaKnown RBP14.65□□□□□ -0.06
LIG1-215ENST00000597901 CXCR5P32302 372 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 DLSTP36957 453 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 TUBB3Q13509 450 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 BOP1Q14137 746 aaKnown RBP14.65□□□□□ -0.06
LIG1-215ENST00000597901 BRD3Q15059 726 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 PCID2Q5JVF3 399 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 TMTC4Q5T4D3 741 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 NAPRTQ6XQN6 538 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 ZNF534Q76KX8 674 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 GSTA5Q7RTV2 222 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 CARFQ8N187 725 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 OR52E1Q8NGJ3 308 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 ELMO1Q92556 727 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.65□□□□□ -0.06
LIG1-215ENST00000597901 STAMBPL1Q96FJ0 436 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 SGSM3Q96HU1 749 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 CATSPER2Q96P56 530 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 C1GALT1Q9NS00 363 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 KCND1Q9NSA2 647 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 GEMIN8Q9NWZ8 242 aaKnown RBP14.65□□□□□ -0.06
LIG1-215ENST00000597901 TCAF1Q9Y4C2 921 aa14.65□□□□□ -0.06
LIG1-215ENST00000597901 SLC5A10A0PJK1 596 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 BHMG1C9JSJ3 638 aaPredicted RBP14.64□□□□□ -0.07
LIG1-215ENST00000597901 TERTO14746 1132 aaKnown RBP14.64□□□□□ -0.07
LIG1-215ENST00000597901 SLC28A2O43868 658 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 NTRK1P04629 796 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 PRKAR1AP10644 381 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 TCN2P20062 427 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 CDH3P22223 829 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 ACADLP28330 430 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 CCR10P46092 362 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 NPY2RP49146 381 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 SESN2P58004 480 aaPredicted RBP14.64□□□□□ -0.07
LIG1-215ENST00000597901 MC1RQ01726 317 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 NFATC3Q12968 1075 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 FASTKD1Q53R41 847 aaKnown RBP14.64□□□□□ -0.07
LIG1-215ENST00000597901 C16orf46Q6P387 395 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 AFTPHQ6ULP2 937 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 AMIGO1Q86WK6 493 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 STARD8Q92502 1023 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 PEX13Q92968 403 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 XKR8Q9H6D3 395 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 AKIRIN1Q9H9L7 192 aaPredicted RBP14.64□□□□□ -0.07
LIG1-215ENST00000597901 LHX9Q9NQ69 397 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 HOMER3Q9NSC5 361 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 STARD5Q9NSY2 213 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 CROTQ9UKG9 612 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 POMT2Q9UKY4 750 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 BTRCQ9Y297 605 aa14.64□□□□□ -0.07
LIG1-215ENST00000597901 MRPS18BQ9Y676 258 aaKnown RBP14.64□□□□□ -0.07
LIG1-215ENST00000597901 GSAPA4D1B5 854 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 MATN2O00339 956 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 BTN3A1O00481 513 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 NRDCO43847 1150 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 KATNA1O75449 491 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 ZIC2O95409 532 aaPredicted RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 OAS2P29728 719 aaKnown RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 PPARGP37231 505 aaPredicted RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 TUBB4BP68371 445 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 PRAMEP78395 509 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 PLOD1Q02809 727 aaPredicted RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 TUBB2AQ13885 445 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 SEMA3AQ14563 771 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 GPR19Q15760 415 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 CRTC2Q53ET0 693 aaPredicted RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 PRICKLE2Q7Z3G6 844 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 ADGRF3Q8IZF5 1079 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 PRELID2Q8N945 189 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 PPHLN1Q8NEY8 458 aaKnown RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 ZNF501Q96CX3 271 aaPredicted RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 TUBB2BQ9BVA1 445 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 EIF2B3Q9NR50 452 aaKnown RBP14.63□□□□□ -0.07
LIG1-215ENST00000597901 BFARQ9NZS9 450 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 ANAPC5Q9UJX4 755 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 KCND3Q9UK17 655 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 ASF1AQ9Y294 204 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 PCDHB3Q9Y5E6 796 aa14.63□□□□□ -0.07
LIG1-215ENST00000597901 F8W8V4 182 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 AP3B1O00203 1094 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 CD3EAPO15446 510 aaKnown RBP14.62□□□□□ -0.07
LIG1-215ENST00000597901 TPBGLP0DKB5 382 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 CRADDP78560 199 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 BASP1P80723 227 aaKnown RBP14.62□□□□□ -0.07
LIG1-215ENST00000597901 CDC20Q12834 499 aa14.62□□□□□ -0.07
LIG1-215ENST00000597901 KCTD19Q17RG1 926 aaPredicted RBP14.62□□□□□ -0.07
LIG1-215ENST00000597901 DEFB109BQ30KR1 87 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms