RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ISL2Q96A47 359 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 ARL8AQ96BM9 186 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 PKNOX2Q96KN3 472 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 OLFM1Q99784 485 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 RNF215Q9Y6U7 377 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 HEATR5BQ9P2D3 2071 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 A0A1W2PPM1 405 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 NIPSNAP2O75323 286 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 RFPL1O75677 317 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 DKK1O94907 266 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 SYF2O95926 243 aaKnown RBP14.67□□□□□ -0.06
TRIM28-207ENST00000597136 MT-ND3P03897 115 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 OR56A5P0C7T3 313 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 F3P13726 295 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 ITGB6P18564 788 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 CD9P21926 228 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 IDSP22304 550 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 FDXRP22570 491 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 SERPINB8P50452 374 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 PGGT1BP53609 377 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 DMPKQ09013 629 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 CLCA4Q14CN2 919 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 DHRS13Q6UX07 377 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 CMC1Q7Z7K0 106 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 TRABD2AQ86V40 505 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 ZNF761Q86XN6 746 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-207ENST00000597136 CEP97Q8IW35 865 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 KRT222Q8N1A0 295 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 GOLGA6L1Q8N7Z2 621 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 LINC00615Q96LM1 132 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-207ENST00000597136 CCM2Q9BSQ5 444 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 STMN4Q9H169 189 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-207ENST00000597136 SNX15Q9NRS6 342 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 TAS2R13Q9NYV9 303 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 ZNF624Q9P2J8 865 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-207ENST00000597136 LRIT1Q9P2V4 623 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 FRYQ5TBA9 3013 aa14.67□□□□□ -0.06
TRIM28-207ENST00000597136 OR52A4PA6NMU1 304 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 QSOX1O00391 747 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 STMN1P16949 149 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 CHRM3P20309 590 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 TYK2P29597 1187 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 PDHA2P29803 388 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 SLC19A1P41440 591 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 MAGEA12P43365 314 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 RPIAP49247 311 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 CSRP3P50461 194 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 DUSP3P51452 185 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-207ENST00000597136 SLC12A2P55011 1212 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 RAB10P61026 200 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 ZKSCAN8Q15776 578 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-207ENST00000597136 AGBL2Q5U5Z8 902 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 ABRAXAS1Q6UWZ7 409 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 PIM3Q86V86 326 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 MARCH9Q86YJ5 346 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 SFRP1Q8N474 314 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 CHCHD4Q8N4Q1 142 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 SPDYE1Q8NFV5 336 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-207ENST00000597136 CCDC74AQ96AQ1 378 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 FAM136AQ96C01 138 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 TSPAN17Q96FV3 270 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 GALPQ9UBC7 116 aa14.66□□□□□ -0.06
TRIM28-207ENST00000597136 APOBEC2Q9Y235 224 aaKnown RBP14.66□□□□□ -0.06
TRIM28-207ENST00000597136 PDZK1P1A8MUH7 402 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 E5RI56 91 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 F8W8V4 182 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 VPS26AO75436 327 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 RFPL3O75679 317 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 TRIM16O95361 564 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 GLB1P16278 677 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 CRABP2P29373 138 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 ATP5DP30049 168 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 SKIV2L2P42285 1042 aaKnown RBP14.65□□□□□ -0.06
TRIM28-207ENST00000597136 PREPP48147 710 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 CLCN7P51798 805 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 ZNF460Q14592 562 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 TTMPQ5BVD1 217 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 SH2D5Q6ZV89 423 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 SRRM1Q8IYB3 904 aaKnown RBP14.65□□□□□ -0.06
TRIM28-207ENST00000597136 Q8N9G6 341 aaPredicted RBP14.65□□□□□ -0.06
TRIM28-207ENST00000597136 TLCD1Q96CP7 247 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 ATP6V1G3Q96LB4 118 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 GPR21Q99679 349 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 WWP1Q9H0M0 922 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 NOVA2Q9UNW9 492 aaKnown RBP14.65□□□□□ -0.06
TRIM28-207ENST00000597136 CFAP20Q9Y6A4 193 aaKnown RBP14.65□□□□□ -0.06
TRIM28-207ENST00000597136 WDFY3Q8IZQ1 3526 aa14.65□□□□□ -0.06
TRIM28-207ENST00000597136 TPRP12270 2363 aaKnown RBP14.65□□□□□ -0.06
TRIM28-207ENST00000597136 C17orf113A0A1B0GUU1 675 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 PHGDHO43175 533 aaKnown RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 B4GAT1O43505 415 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 KCNJ13O60928 360 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 FTH1P02794 183 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 SLC35E2BP0CK96 405 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 PYGBP11216 843 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 VCLP18206 1134 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 CCR7P32248 378 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.64□□□□□ -0.07
TRIM28-207ENST00000597136 EXOC3L1Q86VI1 746 aa14.64□□□□□ -0.07
TRIM28-207ENST00000597136 HM13Q8TCT9 377 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms