RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 ESR1P03372 595 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 PPP1CAP62136 330 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 HSPA14Q0VDF9 509 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 TUBB2AQ13885 445 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 ZNF549Q6P9A3 640 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 RAB11FIP2Q7L804 512 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 LMNTD2Q8IXW0 634 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 SLC22A15Q8IZD6 547 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 MMGT1Q8N4V1 131 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 FBXO36Q8NEA4 188 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 OR5AR1Q8NGP9 310 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 WDR36Q8NI36 951 aaKnown RBP14.6□□□□□ -0.07
SCN1B-204ENST00000596348 FBXO25Q8TCJ0 367 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 CALML6Q8TD86 181 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 ART4Q93070 314 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 TMEM159Q96B96 161 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 CERS2Q96G23 380 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 FAM167BQ9BTA0 163 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 HGH1Q9BTY7 390 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 TUBB2BQ9BVA1 445 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 TSSK1BQ9BXA7 367 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 ZMYND15Q9H091 742 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 RAB17Q9H0T7 212 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 ASCL3Q9NQ33 180 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 GALPQ9UBC7 116 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 MED16Q9Y2X0 877 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 LOXL2Q9Y4K0 774 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 HEBP2Q9Y5Z4 205 aa14.6□□□□□ -0.07
SCN1B-204ENST00000596348 PTPRQQ9UMZ3 2332 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 SNRNP200O75643 2136 aaKnown RBP14.59□□□□□ -0.07
SCN1B-204ENST00000596348 TMEM8BA6NDV4 472 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PLD2O14939 933 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PFDN6O15212 129 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 DXOO77932 396 aaKnown RBP14.59□□□□□ -0.07
SCN1B-204ENST00000596348 SLCO2B1O94956 709 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 C9P02748 559 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 APOA4P06727 396 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PKMP14618 531 aaKnown RBP14.59□□□□□ -0.07
SCN1B-204ENST00000596348 AMD1P17707 334 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 GABRB3P28472 473 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ETV5P41161 510 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 LEPRP48357 1165 aaKnown RBP14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PLTPP55058 493 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PLOD1Q02809 727 aaPredicted RBP14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PLCL1Q15111 1095 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 SNAP47Q5SQN1 464 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ZNF449Q6P9G9 518 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 FOXR1Q6PIV2 292 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 CNSTQ6PJW8 725 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ARHGAP22Q7Z5H3 698 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 CNTN4Q8IWV2 1026 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ZBED8Q8IZ13 594 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 C2CD4AQ8NCU7 369 aaPredicted RBP14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ACVR1CQ8NER5 493 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ZFPM2Q8WW38 1151 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ASZ1Q8WWH4 475 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 SEC14L1Q92503 715 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PANX3Q96QZ0 392 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 FERD3LQ96RJ6 166 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 MVB12BQ9H7P6 319 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 KLHL3Q9UH77 587 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 VPS9D1Q9Y2B5 631 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 PCDHGA8Q9Y5G5 932 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 COLEC10Q9Y6Z7 277 aa14.59□□□□□ -0.07
SCN1B-204ENST00000596348 ZFHX4Q86UP3 3567 aa14.58□□□□□ -0.07
SCN1B-204ENST00000596348 CTAGE15A4D2H0 777 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 A8MU76 341 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 H3BMM5 538 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 HGSO14964 777 aaPredicted RBP14.58□□□□□ -0.08
SCN1B-204ENST00000596348 CAPN5O15484 640 aaPredicted RBP14.58□□□□□ -0.08
SCN1B-204ENST00000596348 KIF1CO43896 1103 aaKnown RBP14.58□□□□□ -0.08
SCN1B-204ENST00000596348 HAUS5O94927 633 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 CTAGE8P0CG41 777 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 TPBGLP0DKB5 382 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 CCL4P13236 92 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 ITIH1P19827 911 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 NDUFS1P28331 727 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 ABCG1P45844 678 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 PRKG2Q13237 762 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 EIF3IQ13347 325 aaKnown RBP14.58□□□□□ -0.08
SCN1B-204ENST00000596348 TRA2AQ13595 282 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCN1B-204ENST00000596348 FRG1Q14331 258 aaKnown RBP14.58□□□□□ -0.08
SCN1B-204ENST00000596348 KRT33BQ14525 404 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 GBX1Q14549 363 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 TMED2Q15363 201 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 TEDDM1Q5T9Z0 273 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 IGF2-ASQ6U949 168 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 OTOAQ7RTW8 1153 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 CTAGE6Q86UF2 777 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 PLXDC1Q8IUK5 500 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 CTAGE4Q8IX94 777 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 FBXO39Q8N4B4 442 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 MNS1Q8NEH6 495 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 OR52E1Q8NGJ3 308 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 GIMAP7Q8NHV1 300 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 SLC46A1Q96NT5 459 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 TGM7Q96PF1 710 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 SLC30A3Q99726 388 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 SAYSD1Q9NPB0 183 aa14.58□□□□□ -0.08
SCN1B-204ENST00000596348 EPHA6Q9UF33 1036 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms