RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 OR6C74A6NCV1 312 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 FAM187AA6NFU0 413 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 BTN3A3O00478 584 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 HGSO14964 777 aaPredicted RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 PRAMEF10O60809 474 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 ITGA2BP08514 1039 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 JMJD7P0C870 316 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 ERVK-10P10266 1014 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 OGNP20774 298 aaKnown RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 RBMS1P29558 406 aaKnown RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 SLC5A2P31639 672 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 SLC1A2P43004 574 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 MAPK10P53779 464 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 ERVPABLB-1P60509 514 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 MPP1Q00013 466 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 TIAL1Q01085 375 aaKnown RBP eCLIP10.85□□□□□ -0.67
VRK3-210ENST00000596121 HSPA14Q0VDF9 509 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 HSP90AA5PQ58FG0 334 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 ZNF470Q6ECI4 717 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 PTRHD1Q6GMV3 140 aaKnown RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 MRNIPQ6NTE8 343 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 TRMT10BQ6PF06 316 aaKnown RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 FBXO38Q6PIJ6 1188 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 UNC5AQ6ZN44 842 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 FAM92BQ6ZTR7 304 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 SDCCAG8Q86SQ7 713 aaPredicted RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 PLXDC1Q8IUK5 500 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 ANKMY2Q8IV38 441 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 SLC22A15Q8IZD6 547 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 LMNTD1Q8N9Z9 388 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
VRK3-210ENST00000596121 OR52E1Q8NGJ3 308 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 FAM136AQ96C01 138 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 CRELD1Q96HD1 420 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 NAF1Q96HR8 494 aaKnown RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 TCF12Q99081 682 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 SLC30A3Q99726 388 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 CMKLR1Q99788 373 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 HGH1Q9BTY7 390 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 RAB33BQ9H082 229 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 IARS2Q9NSE4 1012 aaKnown RBP10.85□□□□□ -0.67
VRK3-210ENST00000596121 EPHA6Q9UF33 1036 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 PLAGL1Q9UM63 463 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 CHMP2BQ9UQN3 213 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 PCDHGA7Q9Y5G6 932 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 TEX264Q9Y6I9 313 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 CFAP47Q6ZTR5 3102 aa10.85□□□□□ -0.67
VRK3-210ENST00000596121 A0A087WV48 116 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 IGHV5-51A0A0C4DH38 117 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 OR5K3A6NET4 321 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 EFCAB7A8K855 629 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 E7ESA3 106 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 IFRD1O00458 451 aaPredicted RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 HAUS5O94927 633 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 SLCO2B1O94956 709 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ANKRD34CP0C6C1 535 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 PKMP14618 531 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 PAMP19021 973 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 POLR2CP19387 275 aaPredicted RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 CSTF2P33240 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
VRK3-210ENST00000596121 PPARGP37231 505 aaPredicted RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 SEPHS1P49903 392 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ADARP55265 1226 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 SH3BP2P78314 561 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ABRQ12979 859 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 CBLBQ13191 982 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 THOC5Q13769 683 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 GRB7Q14451 532 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 GBX1Q14549 363 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 PLCL1Q15111 1095 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 TGIF1Q15583 401 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 CCSMST1Q4G0I0 132 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 DNAJC21Q5F1R6 531 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 STEAP4Q687X5 459 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 IRGCQ6NXR0 463 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 CNSTQ6PJW8 725 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 C19orf48Q6RUI8 117 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ZDHHC24Q6UX98 284 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 KCNMB4Q86W47 210 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 LRRC6Q86X45 466 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ZFAND4Q86XD8 727 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ADGRF3Q8IZF5 1079 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 PDIK1LQ8N165 341 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 AGBL5Q8NDL9 886 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ACVR1CQ8NER5 493 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 GIMAP7Q8NHV1 300 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 HNRNPLLQ8WVV9 542 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 ZNF592Q92610 1267 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ART4Q93070 314 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 TMEM159Q96B96 161 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 RNF31Q96EP0 1072 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 CFAP36Q96G28 342 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 DCBLD2Q96PD2 775 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 MAP3K3Q99759 626 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 CTRCQ99895 268 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 TWSG1Q9GZX9 223 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 ZMYND15Q9H091 742 aa10.84□□□□□ -0.67
VRK3-210ENST00000596121 TFB2MQ9H5Q4 396 aaKnown RBP10.84□□□□□ -0.67
VRK3-210ENST00000596121 MVB12BQ9H7P6 319 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms