RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 NTHL1P78549 312 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 PPIGQ13427 754 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 ZNF846Q147U1 533 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 INTS11Q5TA45 600 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 ZNF697Q5TEC3 545 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 GALNT18Q6P9A2 607 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 CADM3Q8N126 398 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 SNX31Q8N9S9 440 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 PNPT1Q8TCS8 783 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 KCNJ9Q92806 393 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 KCNA7Q96RP8 456 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 BOCQ9BWV1 1114 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 LINC00597Q9H2U6 94 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 ASB8Q9H765 288 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 HECAQ9UBI9 543 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 PTGDR2Q9Y5Y4 395 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 RHOP08100 348 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 C7P10643 843 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 ITGB6P18564 788 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 SERPINA4P29622 427 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 MAPK8P45983 427 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 ATXN3P54252 364 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 CHSY3Q70JA7 882 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 TSPAN33Q86UF1 283 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 SERPINA9Q86WD7 417 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 MYLIPQ8WY64 445 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 PBXIP1Q96AQ6 731 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 SLCO4A1Q96BD0 722 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 C17orf80Q9BSJ5 609 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 BBS2Q9BXC9 721 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 CD320Q9NPF0 282 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 IL26Q9NPH9 171 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 IRAK3Q9Y616 596 aa16.78■□□□□ 0.28
SHKBP1-205ENST00000594973 CROCCQ5TZA2 2017 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 DENND4CQ5VZ89 1909 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 A0A1B0GTL3 188 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 STX16-NPEPL1H3BU86 382 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 GAPDHSO14556 408 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 UBDO15205 165 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 SOCS5O75159 536 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 GPC4O75487 556 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 ESR1P03372 595 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 ZNF182P17025 639 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 IRS1P35568 1242 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 AGTR2P50052 363 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 TMEM240Q5SV17 173 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 HMBOX1Q6NT76 420 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 CYHR1Q6ZMK1 362 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 PELI3Q8N2H9 469 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 CLDN19Q8N6F1 224 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 HPS1Q92902 700 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 ESAMQ96AP7 390 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 C19orf60Q96EN9 201 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 C3orf30Q96M34 536 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 ARPC5LQ9BPX5 153 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 P2RY12Q9H244 342 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 NANOGQ9H9S0 305 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 GPN2Q9H9Y4 310 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 TDP1Q9NUW8 608 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 ANKMY1Q9P2S6 941 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 SLCO3A1Q9UIG8 710 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 DNAJC15Q9Y5T4 150 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
SHKBP1-205ENST00000594973 NPIPB15A6NHN6 443 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 ZNF839A8K0R7 811 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 SYCE1LA8MT33 242 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 PRMT5O14744 637 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 MOSPD3O75425 235 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 EPCAMP16422 314 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 SNRPD1P62314 119 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 PRKCQQ04759 706 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 LRRC73Q5JTD7 316 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 PTRHD1Q6GMV3 140 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 GK5Q6ZS86 529 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 CLYBLQ8N0X4 340 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 STK40Q8N2I9 435 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 SPPL3Q8TCT6 385 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 LMLNQ96KR4 655 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 NOL11Q9H8H0 719 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 FBRSL1Q9HCM7 1045 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 C8orf4Q9NR00 106 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 SMOXQ9NWM0 555 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 CPNE6O95741 557 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 BPIP17213 487 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 POLR2EP19388 210 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 CLCN7P51798 805 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 NFATC2Q13469 925 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 TUBA3CQ13748 450 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 UGT3A2Q3SY77 523 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 ZC3H7AQ8IWR0 971 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 NPAS2Q99743 824 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 ADI1Q9BV57 179 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 CIPCQ9C0C6 399 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 CLPBQ9H078 707 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 KLHL25Q9H0H3 589 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 ZDHHC6Q9H6R6 413 aa16.76■□□□□ 0.27
SHKBP1-205ENST00000594973 ARMC1Q9NVT9 282 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms