RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 EBNA1BP2Q99848 306 aaKnown RBP19.22■□□□□ 0.67
LSM4-203ENST00000593829 CCDC3Q9BQI4 270 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 WASH6PQ9NQA3 447 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 ARHGEF17Q96PE2 2063 aaPredicted RBP19.22■□□□□ 0.67
LSM4-203ENST00000593829 ZFC3H1O60293 1989 aaKnown RBP19.22■□□□□ 0.67
LSM4-203ENST00000593829 SPTBN2O15020 2390 aa19.22■□□□□ 0.67
LSM4-203ENST00000593829 KIR2DS5A0A0G2JLQ3 304 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 A0A0G2JNG1 304 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 ZCWPW2A0A1B0GU75 182 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 GOLGA8TH3BQL2 631 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 KIR2DS3K7RE56 304 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 OR1I1O60431 355 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 DIAPH2O60879 1101 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 BANF1O75531 89 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 PNLIPP16233 465 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 MGAT5Q09328 741 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 NFE2L1Q14494 772 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 KIR2DS5Q14953 304 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 SEPT7Q16181 437 aaKnown RBP19.21■□□□□ 0.67
LSM4-203ENST00000593829 KYNUQ16719 465 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 AGAP9Q5VTM2 703 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 SDCCAG8Q86SQ7 713 aaPredicted RBP19.21■□□□□ 0.67
LSM4-203ENST00000593829 SLC37A2Q8TED4 501 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 INPP5DQ92835 1189 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 PWWP2AQ96N64 755 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 CCM2Q9BSQ5 444 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 RHPN2P1A8MT19 583 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 F8W8V4 182 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 OR56A5P0C7T3 313 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 PAX7P23759 505 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 RPL10P27635 214 aaKnown RBP19.21■□□□□ 0.67
LSM4-203ENST00000593829 SMAD1Q15797 465 aaKnown RBP19.21■□□□□ 0.67
LSM4-203ENST00000593829 METRNLQ641Q3 311 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 NEPROQ6NW34 567 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 ABRAXAS1Q6UWZ7 409 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 FAM83HQ6ZRV2 1179 aaPredicted RBP19.21■□□□□ 0.67
LSM4-203ENST00000593829 CCNJLQ8IV13 435 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 GPR150Q8NGU9 434 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 LRRC39Q96DD0 335 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 CTNNAL1Q9UBT7 734 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 CORO1CQ9ULV4 474 aaPredicted RBP19.21■□□□□ 0.67
LSM4-203ENST00000593829 PRSS21Q9Y6M0 314 aa19.21■□□□□ 0.67
LSM4-203ENST00000593829 C17orf113A0A1B0GUU1 675 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 PFDN6O15212 129 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 PRPF4O43172 522 aaKnown RBP eCLIP19.2■□□□□ 0.66
LSM4-203ENST00000593829 HYAL3O43820 417 aaPredicted RBP19.2■□□□□ 0.66
LSM4-203ENST00000593829 NDUFS3O75489 264 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 GSTM1P09488 218 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 FASLGP48023 281 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 IRX1P78414 480 aaPredicted RBP19.2■□□□□ 0.66
LSM4-203ENST00000593829 GSTM4Q03013 218 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 SF3A3Q12874 501 aaKnown RBP eCLIP19.2■□□□□ 0.66
LSM4-203ENST00000593829 RASA2Q15283 850 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 SLC9B2Q86UD5 537 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 CYP4X1Q8N118 509 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 TEX9Q8N6V9 391 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 AVL9Q8NBF6 648 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
LSM4-203ENST00000593829 HM13Q8TCT9 377 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 TCF12Q99081 682 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 STN1Q9H668 368 aaKnown RBP19.2■□□□□ 0.66
LSM4-203ENST00000593829 FAM8A1Q9UBU6 413 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 RABGEF1Q9UJ41 708 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 ACSL5Q9ULC5 683 aa19.2■□□□□ 0.66
LSM4-203ENST00000593829 SMNDC1O75940 238 aaKnown RBP eCLIP19.19■□□□□ 0.66
LSM4-203ENST00000593829 ELK3P41970 407 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 HALP42357 657 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 INSM1Q01101 510 aaPredicted RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 THOC5Q13769 683 aaKnown RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 BLMHQ13867 455 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 ZNF438Q7Z4V0 828 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 TMPRSS12Q86WS5 348 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 CFAP206Q8IYR0 622 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 GALNT15Q8N3T1 639 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 KIF2BQ8N4N8 673 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 WDR48Q8TAF3 677 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 PITPNM3Q9BZ71 974 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 PPCSQ9HAB8 311 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 SARS2Q9NP81 518 aaKnown RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 C20orf96Q9NUD7 363 aaPredicted RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 IL1RAPL1Q9NZN1 696 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 SENP1Q9P0U3 644 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 SCHIP1Q9P0W5 487 aaPredicted RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 WASF3Q9UPY6 502 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 USH1CQ9Y6N9 552 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 SPEGQ15772 3267 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 PRMT5O14744 637 aaPredicted RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 PPM1DO15297 605 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 TOP3BO95985 862 aaKnown RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 FTH1P02794 183 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 OGNP20774 298 aaKnown RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 FOXK2Q01167 660 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 HHEXQ03014 270 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 SETDB1Q15047 1291 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 SPANXN3Q5MJ09 141 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 HP1BP3Q5SSJ5 553 aaPredicted RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 IGDCC3Q8IVU1 814 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 Q8N9G6 341 aaPredicted RBP19.19■□□□□ 0.66
LSM4-203ENST00000593829 DENND1AQ8TEH3 1009 aa19.19■□□□□ 0.66
LSM4-203ENST00000593829 CPNE7Q9UBL6 633 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms