RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 SPRED2Q7Z698 418 aa19.31■□□□□ 0.68
MBD3-209ENST00000592012 GRASPQ7Z6J2 395 aaPredicted RBP19.31■□□□□ 0.68
MBD3-209ENST00000592012 OTUB2Q96DC9 234 aa19.31■□□□□ 0.68
MBD3-209ENST00000592012 PPP3R2Q96LZ3 170 aa19.31■□□□□ 0.68
MBD3-209ENST00000592012 ALG2Q9H553 416 aa19.31■□□□□ 0.68
MBD3-209ENST00000592012 NANOGQ9H9S0 305 aa19.31■□□□□ 0.68
MBD3-209ENST00000592012 INTS7Q9NVH2 962 aaKnown RBP19.31■□□□□ 0.68
MBD3-209ENST00000592012 ARL15Q9NXU5 204 aa19.31■□□□□ 0.68
MBD3-209ENST00000592012 AP4B1Q9Y6B7 739 aa19.31■□□□□ 0.68
MBD3-209ENST00000592012 ULK1O75385 1050 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 GGT5P36269 586 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 GSK3BP49841 420 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 FPGSQ05932 587 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 AAK1Q2M2I8 961 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 RNF220Q5VTB9 566 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 HMBOX1Q6NT76 420 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 TRIM46Q7Z4K8 759 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 DPP10Q8N608 796 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 SLC12A9Q9BXP2 914 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 SLC2A11Q9BYW1 496 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 FAM83DQ9H4H8 585 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 SMOXQ9NWM0 555 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 TRPS1Q9UHF7 1281 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 CNOT6Q9ULM6 557 aaKnown RBP19.3■□□□□ 0.68
MBD3-209ENST00000592012 POLR3HQ9Y535 204 aaPredicted RBP19.3■□□□□ 0.68
MBD3-209ENST00000592012 CHD9Q3L8U1 2897 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 RGS14O43566 566 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 NUAK1O60285 661 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 XYLBO75191 536 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 RSL1D1O76021 490 aaKnown RBP19.3■□□□□ 0.68
MBD3-209ENST00000592012 CYP2A6P11509 494 aaPredicted RBP19.3■□□□□ 0.68
MBD3-209ENST00000592012 SLC2A4P14672 509 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 EPORP19235 508 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 VIPR1P32241 457 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 ZNF697Q5TEC3 545 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 SLC2A7Q6PXP3 512 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 UBE2R2Q712K3 238 aaPredicted RBP19.3■□□□□ 0.68
MBD3-209ENST00000592012 PTRH1Q86Y79 214 aaKnown RBP19.3■□□□□ 0.68
MBD3-209ENST00000592012 VRK3Q8IV63 474 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 FAM110BQ8TC76 370 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 NUDT8Q8WV74 236 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 ASB11Q8WXH4 323 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 TRIM15Q9C019 465 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 Q9H521 79 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 COQ10BQ9H8M1 238 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 PARVBQ9HBI1 364 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 UBAP1Q9NZ09 502 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 KLQ9UEF7 1012 aa19.3■□□□□ 0.68
MBD3-209ENST00000592012 GRXCR2A6NFK2 248 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 MTX2O75431 263 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 WDR47O94967 919 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 CTSLP07711 333 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 HNRNPA1P09651 372 aaKnown RBP eCLIP19.29■□□□□ 0.68
MBD3-209ENST00000592012 TCF3P15923 654 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 TIMP2P16035 220 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 JAK1P23458 1154 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 PAX7P23759 505 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 WEE1P30291 646 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 CHN2P52757 468 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 CDKL1Q00532 357 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 LIPEQ05469 1076 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 MTX3Q5HYI7 312 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 SERPINA13PQ6UXR4 307 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 DLEU7Q6UYE1 221 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 Q6ZVL8 140 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 AMIGO2Q86SJ2 522 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 GOLM1Q8NBJ4 401 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 TMEM74Q96NL1 305 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 LRRC3BQ96PB8 259 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 SLC32A1Q9H598 525 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 PCDH12Q9NPG4 1184 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 FBXO10Q9UK96 956 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 ZFC3H1O60293 1989 aaKnown RBP19.29■□□□□ 0.68
MBD3-209ENST00000592012 ARNTLO00327 626 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 SLC28A1O00337 649 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 ARPC2O15144 300 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 AP1G1O43747 822 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 TIPRLO75663 272 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 ENO2P09104 434 aaPredicted RBP19.29■□□□□ 0.68
MBD3-209ENST00000592012 SYN1P17600 705 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 AKT1P31749 480 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 NNMTP40261 264 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 HMGCS1Q01581 520 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 IFNEQ86WN2 208 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 HID1Q8IV36 788 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 PIP4K2CQ8TBX8 421 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 ING5Q8WYH8 240 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 USP7Q93009 1102 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 MTG2Q9H4K7 406 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 ZNF490Q9ULM2 529 aaPredicted RBP19.29■□□□□ 0.68
MBD3-209ENST00000592012 AK5Q9Y6K8 562 aa19.29■□□□□ 0.68
MBD3-209ENST00000592012 DHRS12A0PJE2 317 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 H0YJX3 145 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 MANBAO00462 879 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 C8GP07360 202 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 CEBPBP17676 345 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 ETV3P41162 512 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 HSPA13P48723 471 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 DCDC1P59894 354 aa19.28■□□□□ 0.68
MBD3-209ENST00000592012 RPL38P63173 70 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms