RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 CACNG4Q9UBN1 327 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF490Q9ULM2 529 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SNX10Q9Y5X0 201 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 FAM92AA1XBS5 289 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 NPEPPSL1A6NEC2 478 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PSMD11O00231 422 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PLOD3O60568 738 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 ITPKBP27987 946 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MANFP55145 182 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 IL18R1Q13478 541 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 GCNT6Q5T4J0 391 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 C9orf64Q5T6V5 341 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 HPS1Q92902 700 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MAN2B2Q9Y2E5 1009 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PCDHB11Q9Y5F2 797 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SCN2BO60939 215 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 VNN1O95497 513 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 ANGPTL1O95841 491 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CHRNA1P02708 482 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 LIPEQ05469 1076 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 SMCO1Q147U7 214 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 TAF1AQ15573 450 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 UAP1L1Q3KQV9 507 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 EGFLAMQ63HQ2 1017 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 BRAT1Q6PJG6 821 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 C2orf73Q8N5S3 287 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CHCHD6Q9BRQ6 235 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 DSN1Q9H410 356 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 MIOSQ9NXC5 875 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 FBXL12Q9NXK8 326 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 GMEB1Q9Y692 573 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CPED1A4D0V7 1026 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CCNKO75909 580 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CYP4B1P13584 511 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 MEIOBQ8N635 442 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 PJA1Q8NG27 643 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 GPR21Q99679 349 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CARS2Q9HA77 564 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CIDEBQ9UHD4 219 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 FADS2P1A8MWK0 482 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 OR5F1O95221 314 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 TNFP01375 233 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 PRPS2P11908 318 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 CCNFP41002 786 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 PTGER3P43115 390 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 HTRA3P83110 453 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 PIK3R3Q92569 461 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 SMURF2Q9HAU4 748 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 FNIP2Q9P278 1114 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 GPC6Q9Y625 555 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 LRATO95237 230 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 ESR1P03372 595 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 KCNA5P22460 613 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 SCN1BQ07699 218 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 DLG1Q12959 904 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 TSTD2Q5T7W7 516 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 PIGWQ7Z7B1 504 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 P2RY8Q86VZ1 359 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF567Q8N184 647 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 SLC22A18Q96BI1 424 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 OSBPL2Q9H1P3 480 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 NCDNQ9UBB6 729 aa13.11□□□□□ -0.31
SMARCA4-216ENST00000591545 TCEA3O75764 348 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 PTGIRP43119 386 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 AP3S2P59780 193 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 STXBP1P61764 594 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 ARL13AQ5H913 290 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 ADAMTS15Q8TE58 950 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 OVCA2Q8WZ82 227 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 C1GALT1C1Q96EU7 318 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 AGAP2Q99490 1192 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 ALG2Q9H553 416 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 NECTIN3Q9NQS3 549 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 SLC30A4O14863 429 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 CLDN9O95484 217 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 FOSL2P15408 326 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 AVPR1BP47901 424 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 TAS2R50P59544 299 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 RPL26P61254 145 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 CYP1B1Q16678 543 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 IFNLR1Q8IU57 520 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 ANKLE1Q8NAG6 615 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 GLB1L3Q8NCI6 653 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 NXNL1Q96CM4 212 aa13.1□□□□□ -0.31
SMARCA4-216ENST00000591545 C16orf70Q9BSU1 422 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms