RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TRIM48Q8IWZ4 208 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 MPP5Q8N3R9 675 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 HEXDCQ8WVB3 486 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 HDAC10Q969S8 669 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 KIAA1143Q96AT1 154 aaPredicted RBP17.57■□□□□ 0.4
VAT1-208ENST00000590924 STAMBPL1Q96FJ0 436 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 C9orf72Q96LT7 481 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 EBNA1BP2Q99848 306 aaKnown RBP17.57■□□□□ 0.4
VAT1-208ENST00000590924 EFHD1Q9BUP0 239 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 TRIT1Q9H3H1 467 aaKnown RBP17.57■□□□□ 0.4
VAT1-208ENST00000590924 ASB8Q9H765 288 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 GPN2Q9H9Y4 310 aaPredicted RBP17.57■□□□□ 0.4
VAT1-208ENST00000590924 WASH6PQ9NQA3 447 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 POT1Q9NUX5 634 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 TMPRSS11EQ9UL52 423 aa17.57■□□□□ 0.4
VAT1-208ENST00000590924 PDZK1P1A8MUH7 402 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 POLR1CO15160 346 aaPredicted RBP17.56■□□□□ 0.4
VAT1-208ENST00000590924 TOX3O15405 576 aaPredicted RBP17.56■□□□□ 0.4
VAT1-208ENST00000590924 SUV39H1O43463 412 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UGT1A9O60656 530 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 USP1O94782 785 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UBXN7O94888 489 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 DLGAP3O95886 979 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 POLBP06746 335 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UGT1A6P19224 532 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UGT1A1P22309 533 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UGT1A4P22310 534 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 NMBRP28336 390 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 MC4RP32245 332 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 PLTPP55058 493 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 PRAMEP78395 509 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 NFKB2Q00653 900 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 CACNG1Q06432 222 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 DHX9Q08211 1270 aaKnown RBP17.56■□□□□ 0.4
VAT1-208ENST00000590924 ANKRD20A4Q4UJ75 823 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 AGAP9Q5VTM2 703 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 LYPLAL1Q5VWZ2 237 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 KIAA0930Q6ICG6 404 aaPredicted RBP17.56■□□□□ 0.4
VAT1-208ENST00000590924 AFTPHQ6ULP2 937 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 CENPUQ71F23 418 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 DDHD1Q8NEL9 900 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 TSPYL1Q9H0U9 437 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UGT1A7Q9HAW7 530 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UGT1A10Q9HAW8 530 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 UGT1A8Q9HAW9 530 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 SLC2A6Q9UGQ3 507 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 TUBD1Q9UJT1 453 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 DNAJC16Q9Y2G8 782 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 MAD1L1Q9Y6D9 718 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 TEX264Q9Y6I9 313 aa17.56■□□□□ 0.4
VAT1-208ENST00000590924 LOC101059948A0A1B0GTJ6 334 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 CCDC162PA2VCL2 907 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 BRAFP15056 766 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 PGAM1P18669 254 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 PPARGP37231 505 aaPredicted RBP17.55■□□□□ 0.4
VAT1-208ENST00000590924 CSRP3P50461 194 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 POLE2P56282 527 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 TMEM115Q12893 351 aaPredicted RBP17.55■□□□□ 0.4
VAT1-208ENST00000590924 MAP7Q14244 749 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 SEPT7Q16181 437 aaKnown RBP17.55■□□□□ 0.4
VAT1-208ENST00000590924 BBS9Q3SYG4 887 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 MSS51Q4VC12 460 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 ZDHHC24Q6UX98 284 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 CERS6Q6ZMG9 384 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 CEP128Q6ZU80 1094 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 C11orf96Q7Z7L8 435 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 RBM12BQ8IXT5 1001 aaKnown RBP17.55■□□□□ 0.4
VAT1-208ENST00000590924 IFT20Q8IY31 132 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 AGGF1Q8N302 714 aaeCLIP17.55■□□□□ 0.4
VAT1-208ENST00000590924 OR6P1Q8NGX9 317 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 OR4L1Q8NH43 312 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 FBXO25Q8TCJ0 367 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.55■□□□□ 0.4
VAT1-208ENST00000590924 MFSD3Q96ES6 412 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 TTC1Q99614 292 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 ZNF768Q9H5H4 540 aaKnown RBP17.55■□□□□ 0.4
VAT1-208ENST00000590924 SLC40A1Q9NP59 571 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 RPS6KL1Q9Y6S9 549 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
VAT1-208ENST00000590924 SLU7O95391 586 aaKnown RBP17.54■□□□□ 0.4
VAT1-208ENST00000590924 GOT2P00505 430 aaKnown RBP17.54■□□□□ 0.4
VAT1-208ENST00000590924 TYRP1P17643 537 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 AMD1P17707 334 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 VCLP18206 1134 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 IDSP22304 550 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 RPL10P27635 214 aaKnown RBP17.54■□□□□ 0.4
VAT1-208ENST00000590924 FOXN2P32314 431 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 CCR10P46092 362 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 CDC20Q12834 499 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 CUL1Q13616 776 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 GTF2H3Q13889 308 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 TRADDQ15628 312 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 ZRANB3Q5FWF4 1079 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 GPRC6AQ5T6X5 926 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 TRAPPC5Q8IUR0 188 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 LMNTD2Q8IXW0 634 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 NXPE1Q8N323 547 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 EIF1ADQ8N9N8 165 aaKnown RBP17.54■□□□□ 0.4
VAT1-208ENST00000590924 TGM7Q96PF1 710 aa17.54■□□□□ 0.4
VAT1-208ENST00000590924 TRIM4Q9C037 500 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms