RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SLC22A15Q8IZD6 547 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 AGBL5Q8NDL9 886 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 RCBTB1Q8NDN9 531 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 MNS1Q8NEH6 495 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 LKAAEAR1Q8TD35 194 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 TFGQ92734 400 aaPredicted RBP11.6□□□□□ -0.55
LIG3-213ENST00000590630 ZDHHC12Q96GR4 267 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 PRR11Q96HE9 360 aaPredicted RBP11.6□□□□□ -0.55
LIG3-213ENST00000590630 ZNF578Q96N58 590 aaPredicted RBP11.6□□□□□ -0.55
LIG3-213ENST00000590630 SLC46A1Q96NT5 459 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 ASCL3Q9NQ33 180 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 THSD1Q9NS62 852 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 TMEM9Q9P0T7 183 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 EPHA6Q9UF33 1036 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 ZC3H7BQ9UGR2 993 aaKnown RBP11.6□□□□□ -0.55
LIG3-213ENST00000590630 CRYL1Q9Y2S2 319 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 LOXL2Q9Y4K0 774 aa11.6□□□□□ -0.55
LIG3-213ENST00000590630 ITPR1Q14643 2758 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 NBEAQ8NFP9 2946 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CAPN5O15484 640 aaPredicted RBP11.59□□□□□ -0.55
LIG3-213ENST00000590630 TNFSF15O95150 251 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 ANKRD34CP0C6C1 535 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 ITGB6P18564 788 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 MPSTP25325 297 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 FMO4P31512 558 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CSTF2P33240 577 aaKnown RBP eCLIP11.59□□□□□ -0.55
LIG3-213ENST00000590630 CAV1Q03135 178 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 PDIA2Q13087 525 aaKnown RBP11.59□□□□□ -0.55
LIG3-213ENST00000590630 CTBP1Q13363 440 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 FRG1Q14331 258 aaKnown RBP11.59□□□□□ -0.55
LIG3-213ENST00000590630 ST3GAL2Q16842 350 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 HSP90AA5PQ58FG0 334 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CTSL3PQ5NE16 218 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 STEAP4Q687X5 459 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 C8orf74Q6P047 294 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 FOXR1Q6PIV2 292 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 NAPRTQ6XQN6 538 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 UNC5AQ6ZN44 842 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 KIAA0408Q6ZU52 694 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 ARHGAP22Q7Z5H3 698 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 OOSP2Q86WS3 158 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 IGDCC3Q8IVU1 814 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 DENND6AQ8IWF6 608 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CNTN4Q8IWV2 1026 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 KRT222Q8N1A0 295 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 OR5K2Q8NHB8 316 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 GSDMBQ8TAX9 411 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 RSC1A1Q92681 617 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CERS2Q96G23 380 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 PWWP2AQ96N64 755 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 FERD3LQ96RJ6 166 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
LIG3-213ENST00000590630 CCDC68Q9H2F9 335 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 TRIT1Q9H3H1 467 aaKnown RBP11.59□□□□□ -0.55
LIG3-213ENST00000590630 TFB2MQ9H5Q4 396 aaKnown RBP11.59□□□□□ -0.55
LIG3-213ENST00000590630 GRHL1Q9NZI5 618 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 POLG2Q9UHN1 485 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 FBXO5Q9UKT4 447 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 ZMIZ1Q9ULJ6 1067 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CHMP2BQ9UQN3 213 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CDYLQ9Y232 598 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 ASF1AQ9Y294 204 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 COMMD10Q9Y6G5 202 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 CACNA1BQ00975 2339 aa11.59□□□□□ -0.55
LIG3-213ENST00000590630 ADAMTS20P59510 1910 aa11.58□□□□□ -0.55
LIG3-213ENST00000590630 PMS2P1A4D2B8 440 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 OR5K3A6NET4 321 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 CDRT15L2A8MXV6 281 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 E5RI56 91 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 MATN2O00339 956 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 EIF3HO15372 352 aaKnown RBP eCLIP11.58□□□□□ -0.56
LIG3-213ENST00000590630 KDM1AO60341 852 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 NIPSNAP2O75323 286 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 RPN2P04844 631 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 ERVK-10P10266 1014 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 HGFP14210 728 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 PKMP14618 531 aaKnown RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 ATP5DP30049 168 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 LEPRP48357 1165 aaKnown RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 CSE1LP55060 971 aaKnown RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 GFERP55789 205 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 ZNF789Q5FWF6 425 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 SNAP47Q5SQN1 464 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 HP1BP3Q5SSJ5 553 aaPredicted RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 PLEKHS1Q5SXH7 462 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 IRGCQ6NXR0 463 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 UNC5DQ6UXZ4 953 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 PRSS42Q7Z5A4 293 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 GALNT7Q86SF2 657 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 CLEC14AQ86T13 490 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 TBC1D21Q8IYX1 336 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 UNC5BQ8IZJ1 945 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 C2CD4AQ8NCU7 369 aaPredicted RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 PHC3Q8NDX5 983 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 SNIP1Q8TAD8 396 aaKnown RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 LCN9Q8WX39 176 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 KCNJ9Q92806 393 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 FGF11Q92914 225 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms