RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PTRHD1Q6GMV3 140 aaKnown RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 RASGRP3Q8IV61 690 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 SIDT2Q8NBJ9 832 aaKnown RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 CPT1BQ92523 772 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 CAPZA3Q96KX2 299 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 HGH1Q9BTY7 390 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 CARD6Q9BX69 1037 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 TSSK1BQ9BXA7 367 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 XKR8Q9H6D3 395 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 MARCH4Q9P2E8 410 aaPredicted RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 PYCARDQ9ULZ3 195 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 SOX13Q9UN79 622 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 ASF1AQ9Y294 204 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 ZNF106Q9H2Y7 1883 aaKnown RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 SLC5A10A0PJK1 596 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 MAGEB16A2A368 324 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 GOLGA8TH3BQL2 631 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 CES2O00748 559 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 PRMT5O14744 637 aaPredicted RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 PFDN6O15212 129 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 STK17BO94768 372 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 CDH3P22223 829 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 CCR7P32248 378 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 MAGEA6P43360 314 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 FNTAP49354 379 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 RHDQ02161 417 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 ABRQ12979 859 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 IL11RAQ14626 422 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 KCNAB1Q14722 419 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 ZNF658BQ4V348 819 aaPredicted RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 MRNIPQ6NTE8 343 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 FBXO38Q6PIJ6 1188 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 CAND1Q86VP6 1230 aaKnown RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 NLGN4XQ8N0W4 816 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 MPP5Q8N3R9 675 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 MCUQ8NE86 351 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 NLGN4YQ8NFZ3 816 aaPredicted RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 OR52E1Q8NGJ3 308 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 CFAP61Q8NHU2 1237 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 ASZ1Q8WWH4 475 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 BBC3Q96PG8 261 aaPredicted RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 CD180Q99467 661 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 TRIT1Q9H3H1 467 aaKnown RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 TFB2MQ9H5Q4 396 aaKnown RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 MRM3Q9HC36 420 aaKnown RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 PDE7BQ9NP56 450 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 SIDT1Q9NXL6 827 aaKnown RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 SAMD15Q9P1V8 674 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 PILRAQ9UKJ1 303 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 RARRES3Q9UL19 164 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 TDRKHQ9Y2W6 561 aaKnown RBP11.75□□□□□ -0.53
TPM4-212ENST00000590180 IGSF10Q6WRI0 2623 aa11.75□□□□□ -0.53
TPM4-212ENST00000590180 SDK2Q58EX2 2172 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 TLCD2A6NGC4 264 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 BHMG1C9JSJ3 638 aaPredicted RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 BTN3A3O00478 584 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 MAP3K7O43318 606 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 TMEM63AO94886 807 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 APOA4P06727 396 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 MLNP12872 115 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 FOLR1P15328 257 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 PAMP19021 973 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 MAP4P27816 1152 aaKnown RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 ACADLP28330 430 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 FMO4P31512 558 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 KPNA2P52292 529 aaKnown RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 EIF3BP55884 814 aaKnown RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 HSD11B2P80365 405 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 ACY1Q03154 408 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 DHX34Q14147 1143 aaKnown RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 TMTC4Q5T4D3 741 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 CYB5D1Q6P9G0 228 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 TIPARPQ7Z3E1 657 aaKnown RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 HOOK3Q86VS8 718 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 AMIGO1Q86WK6 493 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 PPP1R3BQ86XI6 285 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 KMT5CQ86Y97 462 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 OR5AR1Q8NGP9 310 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 GSDMBQ8TAX9 411 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 KIAA1143Q96AT1 154 aaPredicted RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 SLC41A2Q96JW4 573 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 PPM1MQ96MI6 270 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 NRTNQ99748 197 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 ULBP3Q9BZM4 244 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 SPRY4Q9C004 299 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 DDX47Q9H0S4 455 aaKnown RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 XAB2Q9HCS7 855 aaKnown RBP11.74□□□□□ -0.53
TPM4-212ENST00000590180 SOHLH2Q9NX45 425 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 SEMA5BQ9P283 1151 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 ASIC3Q9UHC3 531 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 POLG2Q9UHN1 485 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 GNPTGQ9UJJ9 305 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 NEU2Q9Y3R4 380 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 SAR1BQ9Y6B6 198 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 MAD1L1Q9Y6D9 718 aa11.74□□□□□ -0.53
TPM4-212ENST00000590180 FAM237BA0A1B0GVD1 139 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms