RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 XRCC3O43542 346 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 LMX1BO60663 402 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 TBCAO75347 108 aaKnown RBP3.29□□□□□ -1.88
SMAD4-207ENST00000589076 TADA2AO75478 443 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 WISP2O76076 250 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 TFAP2AP05549 437 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 DANCRP0C864 163 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 RNF224P0DH78 156 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 CDH1P12830 882 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 AMD1P17707 334 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 DNASE1P24855 282 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 PCGF2P35227 344 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 AHRP35869 848 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SLC9A3P48764 834 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 TFCP2Q12800 502 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 RALGDSQ12967 914 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 PLA2G7Q13093 441 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 COG2Q14746 738 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 RNASEH2BQ5TBB1 312 aaKnown RBP3.29□□□□□ -1.88
SMAD4-207ENST00000589076 STPG1Q5TH74 334 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 KLC3Q6P597 504 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SLFN11Q7Z7L1 901 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 VSIG1Q86XK7 387 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 MAML2Q8IZL2 1156 aaPredicted RBP3.29□□□□□ -1.88
SMAD4-207ENST00000589076 ZNF441Q8N8Z8 693 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 POC1AQ8NBT0 407 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 PPFIBP2Q8ND30 876 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 OR6J1Q8NGC5 347 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 BBS10Q8TAM1 723 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SEMA4DQ92854 862 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SECISBP2LQ93073 1101 aaKnown RBP3.29□□□□□ -1.88
SMAD4-207ENST00000589076 NXNL1Q96CM4 212 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 DUX3Q96PT4 197 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SLC25A23Q9BV35 468 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 NUP85Q9BW27 656 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 EDEM3Q9BZQ6 932 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SLA2Q9H6Q3 261 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SDF2L1Q9HCN8 221 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 PFDN4Q9NQP4 134 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 NPAP1Q9NZP6 1156 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 SLC24A2Q9UI40 661 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 RALYQ9UKM9 306 aaKnown RBP3.29□□□□□ -1.88
SMAD4-207ENST00000589076 GRIP1Q9Y3R0 1128 aa3.29□□□□□ -1.88
SMAD4-207ENST00000589076 A0A0G2JNG1 304 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 PRSS51A0A1B0GVH4 220 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 A0A1W2PS18 150 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 CTAGE9A4FU28 777 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 TSPY2A6NKD2 308 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 PRR32B1ATL7 298 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 SPRY1O43609 319 aaPredicted RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 H1F0P07305 194 aaKnown RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 OR2T7P0C7T2 308 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 CTAGE8P0CG41 777 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 TSPY3P0CV98 308 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 TSPY8P0CW00 308 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 SCG2P13521 617 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 CSF2RAP15509 400 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 MC5RP33032 325 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 MTHFRP42898 656 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 LIMK1P53667 647 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 ERVK11-1P61568 191 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 TSPY1Q01534 308 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 RBPJQ06330 500 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 TROAPQ12815 778 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 GAGE5Q13069 117 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 GAGE6Q13070 117 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 KIR2DS5Q14953 304 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 TNIP1Q15025 636 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 DUOXA1Q1HG43 343 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 ASPRV1Q53RT3 343 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 FAM171BQ6P995 826 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 PLXDC2Q6UX71 529 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 PACS1Q6VY07 963 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 RAD9BQ6WBX8 426 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 ANKRD23Q86SG2 305 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 PTOV1Q86YD1 416 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 CTAGE4Q8IX94 777 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 ZNF595Q8IYB9 648 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 NKAIN3Q8N8D7 197 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 OR2AJ1Q8NGZ0 328 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 CTCFLQ8NI51 663 aaPredicted RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 LINGO1Q96FE5 620 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 LINC00615Q96LM1 132 aaPredicted RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 ZNF582Q96NG8 517 aaPredicted RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 RAB3IPQ96QF0 476 aaPredicted RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 SEPHS2Q99611 448 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 OLFM1Q99784 485 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 EGFL8Q99944 293 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 SLX1AQ9BQ83 275 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 LRRC1Q9BTT6 524 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 FNDC11Q9BVV2 318 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 CSTL1Q9H114 145 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 CNOT10Q9H9A5 744 aaKnown RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 PRMT7Q9NVM4 692 aaPredicted RBP3.28□□□□□ -1.88
SMAD4-207ENST00000589076 MIOSQ9NXC5 875 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 DPP3Q9NY33 737 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 RHCGQ9UBD6 479 aa3.28□□□□□ -1.88
SMAD4-207ENST00000589076 A0A1W2PRQ8 180 aa3.27□□□□□ -1.89
SMAD4-207ENST00000589076 MED19A0JLT2 244 aaPredicted RBP3.27□□□□□ -1.89
SMAD4-207ENST00000589076 C5orf60A6NFR6 353 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms