RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PROS1P07225 676 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 MTHFD1P11586 935 aaKnown RBP19.12■□□□□ 0.65
CIRBP-220ENST00000588917 CNTFP26441 200 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 SLC19A1P41440 591 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 PREPP48147 710 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 LIMK2P53671 638 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 RBM20Q5T481 1227 aaKnown RBP19.12■□□□□ 0.65
CIRBP-220ENST00000588917 XKR5Q6UX68 686 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 NAPRTQ6XQN6 538 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 WDR48Q8TAF3 677 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 SLC44A1Q8WWI5 657 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 ATXN7L3BQ96GX2 97 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 GPR22Q99680 433 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 MVB12BQ9H7P6 319 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 UCK1Q9HA47 277 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 IMP3Q9NV31 184 aaKnown RBP19.12■□□□□ 0.65
CIRBP-220ENST00000588917 SCHIP1Q9P0W5 487 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-220ENST00000588917 POLG2Q9UHN1 485 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 ZNF180Q9UJW8 692 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 CDYLQ9Y232 598 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 APOBEC2Q9Y235 224 aaKnown RBP19.12■□□□□ 0.65
CIRBP-220ENST00000588917 MED16Q9Y2X0 877 aa19.12■□□□□ 0.65
CIRBP-220ENST00000588917 FRYQ5TBA9 3013 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 LY6G6EA0A0G2JKS1 128 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 OR52A4PA6NMU1 304 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 POC1B-GALNT4F8VUJ3 575 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 KRT38O76015 456 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 ITGA2BP08514 1039 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 F7P08709 466 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 FDXRP22570 491 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 ACADLP28330 430 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 CDKN2DP55273 166 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 MAZP56270 477 aaKnown RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 IL2P60568 153 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 UBE2IP63279 158 aaKnown RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 FOXC1Q12948 553 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 GBX1Q14549 363 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 USP10Q14694 798 aaKnown RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 UAP1Q16222 522 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 UNC5DQ6UXZ4 953 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 EFL1Q7Z2Z2 1120 aaKnown RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 SIDT2Q8NBJ9 832 aaKnown RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 UHMK1Q8TAS1 419 aaKnown RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 IFI44Q8TCB0 444 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 CD200R1Q8TD46 325 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 MAGEC3Q8TD91 643 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 SKA2Q8WVK7 121 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 PATE1Q8WXA2 126 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 FAM136AQ96C01 138 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 FERD3LQ96RJ6 166 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 SLC38A3Q99624 504 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 SLC40A1Q9NP59 571 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 GALPQ9UBC7 116 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 SLC24A2Q9UI40 661 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 MTO1Q9Y2Z2 717 aaKnown RBP19.11■□□□□ 0.65
CIRBP-220ENST00000588917 RNF215Q9Y6U7 377 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 U3KQA8 63 aa19.11■□□□□ 0.65
CIRBP-220ENST00000588917 PPM1DO15297 605 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 MPC1LP0DKB6 136 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 STMN1P16949 149 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 SAT1P21673 171 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 ABCG1P45844 678 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 ABRQ12979 859 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 NAA30Q147X3 362 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-220ENST00000588917 NR1D2Q14995 579 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 ZNF438Q7Z4V0 828 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 CCDC91Q7Z6B0 441 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 TBC1D21Q8IYX1 336 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 NKAPQ8N5F7 415 aaKnown RBP19.1■□□□□ 0.65
CIRBP-220ENST00000588917 SPDYE1Q8NFV5 336 aaPredicted RBP19.1■□□□□ 0.65
CIRBP-220ENST00000588917 MRRFQ96E11 262 aaKnown RBP19.1■□□□□ 0.65
CIRBP-220ENST00000588917 RMDN2Q96LZ7 410 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 PAFAH2Q99487 392 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 ABCG4Q9H172 646 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 TRIT1Q9H3H1 467 aaKnown RBP19.1■□□□□ 0.65
CIRBP-220ENST00000588917 EPB41L1Q9H4G0 881 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 SLC39A10Q9ULF5 831 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 WASF3Q9UPY6 502 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 ASF1AQ9Y294 204 aa19.1■□□□□ 0.65
CIRBP-220ENST00000588917 CABIN1Q9Y6J0 2220 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 FAM155BO75949 473 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 MYF5P13349 255 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 CRABP2P29373 138 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 HSD17B3P37058 310 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 CCNFP41002 786 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 ACADVLP49748 655 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 EPHA4P54764 986 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 DNAJC3Q13217 504 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 EFTUD2Q15029 972 aaKnown RBP eCLIP19.09■□□□□ 0.651e-24■■□□□ 12.1
CIRBP-220ENST00000588917 ACSBG2Q5FVE4 666 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 GUSBP11Q6P575 273 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 PAQR3Q6TCH7 311 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 TMEM26Q6ZUK4 368 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 VRK3Q8IV63 474 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 SFTPA2Q8IWL1 248 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 MREGQ8N565 214 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 PDLIM5Q96HC4 596 aaKnown RBP19.09■□□□□ 0.65
CIRBP-220ENST00000588917 GPAMQ9HCL2 828 aa19.09■□□□□ 0.65
CIRBP-220ENST00000588917 CCDC151A5D8V7 595 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms