RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CAMKK1Q8N5S9 505 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 BIRC7Q96CA5 298 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 RMDN2Q96LZ7 410 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 SIKE1Q9BRV8 207 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 TNFRSF12AQ9NP84 129 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 KCNK4Q9NYG8 393 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 ZNHIT2Q9UHR6 403 aa25.45■■□□□ 1.66
SCAMP4-210ENST00000588555 E2F3O00716 465 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 FSBPO95073 299 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 AQP5P55064 265 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 SULT1C3Q6IMI6 304 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 AGR3Q8TD06 166 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 UBTD2Q8WUN7 234 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 TMEM79Q9BSE2 394 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 TMEM120AQ9BXJ8 343 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 ZBTB26Q9HCK0 441 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 FGF22Q9HCT0 170 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 EIF2B4Q9UI10 523 aaKnown RBP25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 HS3ST3A1Q9Y663 406 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 USH1CQ9Y6N9 552 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 ERICH4A6NGS2 130 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 ARHGEF33A8MVX0 844 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 PPP6CO00743 305 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 TSPAN8P19075 237 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 CYP2A7P20853 494 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 MAPK9P45984 424 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 NAA20P61599 178 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 RPA4Q13156 261 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 NFATC4Q14934 902 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 TPRG1LQ5T0D9 272 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 CUZD1Q86UP6 607 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 EGFL8Q99944 293 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 OR52A5Q9H2C5 316 aa25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 EML4Q9HC35 981 aaKnown RBP25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 TNPO3Q9Y5L0 923 aaKnown RBP25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 ZFC3H1O60293 1989 aaKnown RBP25.44■■□□□ 1.66
SCAMP4-210ENST00000588555 KLHL33A6NCF5 533 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 EBAG9O00559 213 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 ARFIP2P53365 341 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 CLCQ05315 142 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 PYCR3Q53H96 274 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 ZNF771Q7L3S4 317 aaPredicted RBP25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 PLCD4Q9BRC7 762 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 MRPL40Q9NQ50 206 aaKnown RBP25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 ARL15Q9NXU5 204 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 DLGAP2Q9P1A6 1054 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 SUFUQ9UMX1 484 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 DMTF1Q9Y222 760 aa25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.43■■□□□ 1.66
SCAMP4-210ENST00000588555 PRAMEF26H0Y7S4 382 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 K7ESF4 209 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 MATN2O00339 956 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 ANXA5P08758 320 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 ACADLP28330 430 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 CCR3P51677 355 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 AP1S2P56377 157 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 DMPKQ09013 629 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 LCP2Q13094 533 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 ZXDCQ2QGD7 858 aaPredicted RBP25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 METRNLQ641Q3 311 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 ABI3BPQ7Z7G0 1075 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 CFAP61Q8NHU2 1237 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 MCOLN3Q8TDD5 553 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 NECAB3Q96P71 396 aaPredicted RBP25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 ORAI3Q9BRQ5 295 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 TIMM29Q9BSF4 260 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 TRIM54Q9BYV2 358 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 BDP1A6H8Y1 2624 aa25.42■■□□□ 1.66
SCAMP4-210ENST00000588555 PRR19A6NJB7 356 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 TMEM233B4DJY2 109 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 CXCL12P48061 93 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 HK2P52789 917 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 YPEL5P62699 121 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 SH3BP2P78314 561 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 SH2D4BQ5SQS7 431 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 CWF19L1Q69YN2 538 aaKnown RBP25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 CHST15Q7LFX5 561 aaPredicted RBP25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 OR56A4Q8NGH8 313 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 TRPC4APQ8TEL6 797 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 IER2Q9BTL4 223 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 PLXND1Q9Y4D7 1925 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 PRSS38A1L453 326 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 KRT87PA6NCN2 255 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 HIST1H2AGP0C0S8 130 aaPredicted RBP25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 HIST1H2ADP20671 130 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 GGT5P36269 586 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 NUDT1P36639 197 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 HSPA7P48741 367 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 METTL2BQ6P1Q9 378 aaKnown RBP25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 GALNT13Q8IUC8 556 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 HIST1H2AHQ96KK5 128 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 FOPNLQ96NB1 174 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 HIST1H2AJQ99878 128 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 EBF4Q9BQW3 602 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 H2AFJQ9BTM1 129 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 CD244Q9BZW8 370 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 SEMA4BQ9NPR2 832 aaPredicted RBP25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 WWOXQ9NZC7 414 aa25.41■■□□□ 1.66
SCAMP4-210ENST00000588555 A0A1B0GTL3 188 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms